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Academic Journal

Single-Cell RNA Sequencing on Formalin-Fixed and Paraffin-Embedded (FFPE) Tissue Identified Multi-Ciliary Cells in Breast Cancer.

  • Authors : González-Martínez S; 'Contigo Contra el Cáncer de la Mujer' Foundation, 28010 Madrid, Spain.; Molecular Pathology of Cancer Group, Ramón y Cajal Health Research Institute (IRYCIS), 28034 Madrid, Spain.

Subjects: Breast Neoplasms*/Breast Neoplasms*/Breast Neoplasms*/genetics ; Breast Neoplasms*/Breast Neoplasms*/Breast Neoplasms*/pathology ; Paraffin Embedding*/Paraffin Embedding*/Paraffin Embedding*/methods

  • Source: Cells [Cells] 2025 Jan 29; Vol. 14 (3). Date of Electronic Publication: 2025 Jan 29.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101600052 Publication Model: Electronic Cited Medium: Internet ISSN: 2073-4409

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Academic Journal

Formalin-free tissue embedding is less hazardous and results in better DNA quality.

Subjects: Formaldehyde*/Formaldehyde*/Formaldehyde*/chemistry ; DNA* ; Paraffin Embedding*/Paraffin Embedding*/Paraffin Embedding*/methods

  • Source: PloS one [PLoS One] 2024 Dec 30; Vol. 19 (12), pp. e0316107. Date of Electronic Publication: 2024 Dec 30 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Optimizing RNA extraction methods for high-throughput transcriptome sequencing of formalin-fixed paraffin-embedded cardiac tissue specimens.

Subjects: Formaldehyde*/Formaldehyde*/Formaldehyde*/chemistry ; High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/High-Throughput Nucleotide Sequencing*/methods ; Paraffin Embedding*/Paraffin Embedding*/Paraffin Embedding*/methods

  • Source: PloS one [PLoS One] 2024 Dec 26; Vol. 19 (12), pp. e0315098. Date of Electronic Publication: 2024 Dec 26 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Single nucleus DNA sequencing of flow sorted archived frozen and formalin fixed paraffin embedded solid tumors.

  • Authors : Zhou Y; Department of Research, Mayo Clinic in Arizona, Scottsdale, AZ, USA.; Chen X

Subjects: Paraffin Embedding* ; Formaldehyde* ; Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods

  • Source: BMC genomics [BMC Genomics] 2024 Oct 08; Vol. 25 (1), pp. 943. Date of Electronic Publication: 2024 Oct 08.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Academic Journal

Aqueous extraction of formalin-fixed paraffin-embedded tissue and detection of prion disease using real-time quaking-induced conversion.

  • Authors : Nicholson EM; Virus and Prion Research Unit, National Animal Disease Center, USDA-ARS, 1920 Dayton Ave., Ames, IA, 50010, USA. .; Greenlee JJ

Subjects: Formaldehyde*/Formaldehyde*/Formaldehyde*/chemistry ; Paraffin Embedding*/Paraffin Embedding*/Paraffin Embedding*/methods ; Prion Diseases*/Prion Diseases*/Prion Diseases*/diagnosis

  • Source: BMC research notes [BMC Res Notes] 2024 Sep 16; Vol. 17 (1), pp. 266. Date of Electronic Publication: 2024 Sep 16.Publisher: Biomed Central Country of Publication: England NLM ID: 101462768 Publication Model: Electronic Cited Medium: Internet ISSN: 1756-0500

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Academic Journal

Spatial transcriptomic and morpho-functional information derived from single mouse FFPE slides allows in-depth fingerprinting of lung fibrosis.

  • Authors : Ferrini E; Molecular Imaging Facility, Experimental Pharmacology & Translational Science Department, Chiesi Farmaceutici S.P.A, Parma, Italy.; ANTHEM (AdvaNced Technologies for Human-centrEd Medicine), Spoke3, Milan, Italy.

Subjects: Paraffin Embedding*/Paraffin Embedding*/Paraffin Embedding*/methods ; Transcriptome* ; Pulmonary Fibrosis*/Pulmonary Fibrosis*/Pulmonary Fibrosis*/genetics

  • Source: Respiratory research [Respir Res] 2025 Jul 02; Vol. 26 (1), pp. 225. Date of Electronic Publication: 2025 Jul 02.Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 101090633 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Robust detection of clinically relevant features in single-cell RNA profiles of patient-matched fresh and formalin-fixed paraffin-embedded (FFPE) lung cancer tissue.

  • Authors : Trinks A; Bioportal Single Cells, Berlin Institute of Health at Charité - Universitätsmedizin Berlin, Berlin, Germany.; Milek M

Subjects: Paraffin Embedding*/Paraffin Embedding*/Paraffin Embedding*/methods ; Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods ; Lung Neoplasms*/Lung Neoplasms*/Lung Neoplasms*/genetics

  • Source: Cellular oncology (Dordrecht, Netherlands) [Cell Oncol (Dordr)] 2024 Aug; Vol. 47 (4), pp. 1221-1231. Date of Electronic Publication: 2024 Feb 01.Publisher: Springer Country of Publication: Netherlands NLM ID: 101552938 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Evaluation of DNAmAge in paired fresh, frozen, and formalin-fixed paraffin-embedded heart tissues.

  • Authors : Pruszkowska-Przybylska P; Department of Anthropology, Faculty of Biology and Environmental Protection, University of Łódź, Łódź, Poland.; Dupont ME

Subjects: DNA Methylation* ; Paraffin Embedding*/Paraffin Embedding*/Paraffin Embedding*/methods ; Formaldehyde*/Formaldehyde*/Formaldehyde*/chemistry

  • Source: PloS one [PLoS One] 2024 May 08; Vol. 19 (5), pp. e0299557. Date of Electronic Publication: 2024 May 08 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Direct immunofluorescence on formalin-fixed, paraffin-embedded versus fresh frozen human renal biopsies: a comparative study.

  • Authors : Eidan AJ; Immunology, Department of Basic Science, Faculty of Nursing, University of Kufa, Al-Najaf, Iraq.

Subjects: Paraffin Embedding* ; Formaldehyde*/Formaldehyde*/Formaldehyde*/chemistry ; Kidney*/Kidney*/Kidney*/pathology

  • Source: Journal of immunoassay & immunochemistry [J Immunoassay Immunochem] 2024 May 03; Vol. 45 (3), pp. 292-305. Date of Electronic Publication: 2024 Jan 23.Publisher: Taylor & Francis Country of Publication: England NLM ID: 100963688 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Modification of the Hi-C Technology for Molecular Genetic Analysis of Formalin-Fixed Paraffin-Embedded Sections of Tumor Tissues.

  • Authors : Gridina MM; Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, 630090, Russia. .; Novosibirsk State University, Novosibirsk, 630090, Russia.

Subjects: Paraffin Embedding* ; Neoplasms*/Neoplasms*/Neoplasms*/genetics ; Neoplasms*/Neoplasms*/Neoplasms*/pathology

  • Source: Biochemistry. Biokhimiia [Biochemistry (Mosc)] 2024 Apr; Vol. 89 (4), pp. 637-652.Publisher: MAIK Nauka/Interperiodica Country of Publication: United States NLM ID: 0376536 Publication Model: Print Cited Medium: Internet ISSN:

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