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The Flexible Phenotype : A Body-Centred Integration of Ecology, Physiology, and Behaviour

• Authors : Theunis Piersma; Jan A. van Gils

Subjects: Phenotype; Phenotypic plasticity; GenomicsSCIENCE / Life Sciences / Anatomy & Physiology

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G2PDeep-v2: A Web-Based Deep-Learning Framework for Phenotype Prediction and Biomarker Discovery for All Organisms Using Multi-Omics Data.

• Authors : Zeng S; Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO 65211, USA.; Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA.

Subjects: Biomarkers*/Biomarkers*/Biomarkers*/analysis ; Biomarkers*/Biomarkers*/Biomarkers*/metabolism ; Computational Biology*/Computational Biology*/Computational Biology*/methods

• Source: Biomolecules [Biomolecules] 2025 Dec 01; Vol. 15 (12). Date of Electronic Publication: 2025 Dec 01.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101596414 Publication Model: Electronic Cited Medium: Internet ISSN: 2218-273X

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Prime Editing Driven Functional Genomics: Bridging Genotype to Phenotype in the Post-Genomic Era.

• Authors : Begum SN; Hasan Laboratory, Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Centre, Navi Mumbai 410210, India.; Hasan SK

Subjects: Gene Editing*/Gene Editing*/Gene Editing*/methods ; Genomics*/Genomics*/Genomics*/methods; Humans

• Source: International journal of molecular sciences [Int J Mol Sci] 2026 Feb 10; Vol. 27 (4). Date of Electronic Publication: 2026 Feb 10.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Genomic Landscape of Mixed Phenotype Acute Leukemia Associated With Immunophenotypic Lineage Predominance: Impact on Diagnosis and Treatment.

• Authors : Zheng R; Department of Pathology, University of Texas Southwestern Medical Center, Dallas, Texas, USA.; Gagan JR

Subjects: Leukemia, Biphenotypic, Acute*/Leukemia, Biphenotypic, Acute*/Leukemia, Biphenotypic, Acute*/diagnosis ; Leukemia, Biphenotypic, Acute*/Leukemia, Biphenotypic, Acute*/Leukemia, Biphenotypic, Acute*/genetics ; Leukemia, Biphenotypic, Acute*/Leukemia, Biphenotypic, Acute*/Leukemia, Biphenotypic, Acute*/therapy

• Source: European journal of haematology [Eur J Haematol] 2025 Jun; Vol. 114 (6), pp. 1041-1051. Date of Electronic Publication: 2025 Mar 18.Publisher: Blackwell Country of Publication: England NLM ID: 8703985 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1600-0609

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A Linear-Transformer Hybrid for SNP-Based Genotype-to-Phenotype Prediction in Grapevine

• Authors : Wang, Yibin; Jayakodi, Murukarthick; Kirubakaran, Silvas

Subjects: Genomics; Artificial Intelligence

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EFGPP: Exploratory framework for genotype-phenotype prediction

• Authors : Muneeb, Muhammad; Ascher, David B.

Subjects: Genomics; Machine Learning

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PhenotypeToGeneDownloaderR: automated multi-source retrieval and validation of phenotype-associated genes

• Authors : Muneeb, Muhammad; Ascher, David B.

Subjects: Genomics

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SNPgen: Phenotype-Supervised Genotype Representation and Synthetic Data Generation via Latent Diffusion

• Authors : Lampis, Andrea; Massi, Michela Carlotta; Pirastu, Nicola

Subjects: Machine Learning; Genomics

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Benchmarking end-to-end genotype-to-phenotype prediction workflows across 80 openSNP phenotypes

• Authors : Muneeb, Muhammad; Ascher, David B.; Myung, YooChan

Subjects: Genomics

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Benchmarking interpretability of deep learning for predictive genomics: Recall, precision, and variability of feature attribution.

• Authors : Reynolds J; School of Computer Science, Gallogly College of Engineering, University of Oklahoma, Norman, Oklahoma, United States of America.; Pan C

Subjects: Genomics*/Genomics*/Genomics*/methods ; Deep Learning*; Multifactorial Inheritance/Multifactorial Inheritance/Multifactorial Inheritance/genetics

• Source: PLoS computational biology [PLoS Comput Biol] 2025 Dec 05; Vol. 21 (12), pp. e1013784. Date of Electronic Publication: 2025 Dec 05 (Print Publication: 2025).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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