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OffRisk: a docker image for annotating CRISPR off-target sites in the human genome.

• Authors : Barkai, Gil-ad¹; Malul, Tal¹; Eliaz, Yossi^2,3,4

• Source: Bioinformatics Advances. 2023, Vol. 3 Issue 1, p1-4. 4p.

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AI for the collective analysis of a massive number of genome sequences: various examples from the small genome of pandemic SARS-CoV-2 to the human genome.

• Authors : Ikemura T; Faculty of Bioscience, Nagahama Institute of Bio-Science and Technology.; Iwasaki Y

Subjects: Artificial Intelligence* ; Genome, Human* ; Genome, Viral*

• Source: Genes & genetic systems [Genes Genet Syst] 2021 Dec 16; Vol. 96 (4), pp. 165-176. Date of Electronic Publication: 2021 Sep 27.Publisher: Genetics Society of Japan Country of Publication: Japan NLM ID: 9607822 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Integrative machine learning framework for the identification of cell-specific enhancers from the human genome.

• Authors : Basith S; Department of Physiology, Ajou University School of Medicine, Republic of Korea.; Hasan MM

Subjects: Enhancer Elements, Genetic* ; Genome, Human* ; Machine Learning*

• Source: Briefings in bioinformatics [Brief Bioinform] 2021 Nov 05; Vol. 22 (6).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN:

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Prot2HG: a database of protein domains mapped to the human genome.

• Authors : Stanek D; DNA Laboratory, Department of Paediatric Neurology, 2nd Faculty of Medicine, Charles University in Prague and University Hospital Motol, Prague, V Úvalu 84, 150 06 Czech Republic.; Bis-Brewer DM

Subjects: Databases, Genetic* ; Genetic Variation*; Computational Biology/Computational Biology/Computational Biology/*methods

• Source: Database : the journal of biological databases and curation [Database (Oxford)] 2020 Jan 01; Vol. 2020.Publisher: Oxford Journals Country of Publication: England NLM ID: 101517697 Publication Model: Print Cited Medium: Internet ISSN: 1758-0463

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Stable bulged G-quadruplexes in the human genome: identification, experimental validation and functionalization

• Authors : Csaba Papp; Vineeth Thachappilly Mukundan; Piroon Jenjaroenpun ...

Subjects: DNA Nanotechnology and Bioanalytical Applications; Gene; Computational biology

• Source: Nucleic Acids Res

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Methods for Functional Characterization of Genetic Polymorphisms of Non-Coding Regulatory Regions of the Human Genome

• Authors : Aksinya N, Uvarova; Elena A, Tkachenko; Ekaterina M, Stasevich

Subjects: 0303 health sciences; 03 medical and health sciences; Polymorphism, Genetic

• Source: Biochemistry (Moscow). 89:1002-1013

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Systematic discovery of conservation states for single-nucleotide annotation of the human genome.

• Authors : Arneson A; 1Bioinformatics Interdepartmental Program, University of California, Los Angeles, Los Angeles, CA 90095 USA.; 2Department of Biological Chemistry, University of California, Los Angeles, Los Angeles, CA 90095 USA.

Subjects: Genome, Human*; Computational Biology/Computational Biology/Computational Biology/*methods ; Genomics/Genomics/Genomics/*methods

• Source: Communications biology [Commun Biol] 2019 Jul 02; Vol. 2, pp. 248. Date of Electronic Publication: 2019 Jul 02 (Print Publication: 2019).Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: eCollection Cited Medium: Internet ISSN:

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A map of direct TF-DNA interactions in the human genome.

• Authors : Gheorghe M; Centre for Molecular Medicine Norway (NCMM), University of Oslo, Oslo, Norway.; Sandve GK

Subjects: Computational Biology*; DNA/DNA/DNA/*genetics ; Genome, Human/Genome, Human/Genome, Human/*genetics

• Source: Nucleic acids research [Nucleic Acids Res] 2019 Feb 28; Vol. 47 (4), pp. e21.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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PopHumanScan: the online catalog of human genome adaptation.

• Authors : Murga-Moreno J; Institut de Biotecnologia i de Biomedicina and Departament de Genètica i de Microbiologia, Universitat Autònoma de Barcelona, 08193 Bellaterra, Barcelona, Spain.; Coronado-Zamora M

Subjects: Selection, Genetic*; Adaptation, Physiological/Adaptation, Physiological/Adaptation, Physiological/*genetics ; Computational Biology/Computational Biology/Computational Biology/*methods

• Source: Nucleic acids research [Nucleic Acids Res] 2019 Jan 08; Vol. 47 (D1), pp. D1080-D1089.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Quality assessment of the human genome sequence.

• Authors : Schmutz J; Stanford Human Genome Center, Department of Genetics, Stanford University School of Medicine, 975 California Avenue, Palo Alto, California 94304, USA. ; Wheeler J

Subjects: Genome, Human* ; Human Genome Project*; Computational Biology/Computational Biology/Computational Biology/*standards

• Source: Nature [Nature] 2004 May 27; Vol. 429 (6990), pp. 365-8.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print Cited Medium: Internet ISSN:

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