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Ivcmassist: decision support system for detection of acanthamoeba keratitis cysts in vivo confocal microscopy images

• Authors : Yan, Song; Meichen, Ji; Roth, Jenny

Subjects: Acanthamoeba keratitis; deep learning; image processing

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Deep Learning approaches for Head and Operculum Segmentation in Zebrafish Microscopy Images

• Authors : Kumar, Navdeep; Carletti, Alessio; Gavaia, Paulo Jorge

Subjects: Deep Learning; image segmentation; microscopy

• Source: urn:isbn:978-3-030-89128-2Part of the Lecture Notes in Computer Science book series (LNIP, volume 13052) (2021-09-28); International Conference on Computer Analysis of

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SPITFIR(e): a supermaneuverable algorithm for fast denoising and deconvolution of 3D fluorescence microscopy images and videos

• Authors : Prigent, Sylvain; Nguyen, Hoai-Nam; Leconte, Ludovic ...

Subjects: [SDV.IB] Life Sciences [q-bio]/Bioengineering; 0301 basic medicine; 0303 health sciences

• Source: Sci RepScientific Reports, Vol 13, Iss 1, Pp 1-21 (2023)

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ADAPTIVE ATTENTION RESIDUAL U-NET FOR FILAMENT SEGMENTATION IN BIOMEDICAL MICROSCOPY IMAGES

• Authors : Ait Laydi, Achraf; Crespo, Mewen; El Mourabit, Yousef ...

Subjects: Attention module; Residual blocks; U-Net based architectureHouston; TX; United States

• Source: International Symposium on Biomedical Imaging (ISBI 2025) ; https://hal.science/hal-05158388 ; International Symposium on Biomedical Imaging (ISBI 2025), Apr 2025, Houston, TX, United States ;

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Automated detection and segmentation of bacteriocytes from light microscopy images

• Authors : Hutin, Nathan; Lopes, Mélanie, Ribeiro; Gaget, Karen ...

Subjects: [INFO]Computer Science [cs]; [SDV]Life Sciences [q-bio]Nice; FranceNice, France

• Source: Colloque d'Intelligence Artificielle en Imagerie Biomédical (IABM) ; https://hal.science/hal-05109817 ; Colloque d'Intelligence Artificielle en Imagerie Biomédical (IABM), Mar 2025, Nice, France

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Automated noninvasive epithelial cell counting in phase contrast microscopy images with automated parameter selection

• Authors : R. FLIGHT; G. LANDINI; I.B. STYLES

Subjects: Automation, Laboratory; 0301 basic medicine; 0303 health sciences

• Source: J Microsc

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LocalZProjector and DeProj: a toolbox for local 2D projection and accurate morphometrics of large 3D microscopy images

• Authors : Herbert, Sébastien; Valon, Léo; Mancini, Laure ...

Subjects: Morphology; 0301 basic medicine; Microscopy

• Source: BMC BiolBMC Biology, Vol 19, Iss 1, Pp 1-13 (2021)BMC BiologyBMC Biology, 2021, 19 (1), pp.136. ⟨10.1186/s12915-021-01037-w⟩

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Multi-scale Stochastic Generation of Labelled Microscopy Images for Neuron Segmentation

• Authors : Decroocq, Méghane; Xu, Binbin; Thompson-Peer, Katherine L. ...

Subjects: multi-scale cGAN; microscopy imaging; neuron tracingParis; France

• Source: https://proceedings.mlr.press/v250/ ; MIDL 2024 - International Conference on Medical Imaging with Deep Learning ; https://imt-mines-ales.hal.science/hal-05212761 ; MIDL 2024 - International

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Restoration of mitochondria cristae in live microscopy images

• Authors : Papereux, Salomé; Leconte, Ludovic; Valades-Cruz, Cesar Augusto ...

Subjects: Convolution Neural Network; Image restoration; Mitochondria cristaeGrenoble; France

• Source: IABM 2024 - Colloque Français d'Intelligence Artificielle en Imagerie Biomédicale ; https://hal.science/hal-04871103 ; IABM 2024 - Colloque Français d'Intelligence Artificielle en Imagerie

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Data augmentation for pathogen segmentation in vinewood fluorescence microscopy images

• Authors : Munsch, Julie; Ouali, Sonia; Courbot, Jean-Baptiste ...

Subjects: data augmentation; image segmentation; fluorescence microscopy deep learningOffenburg; Germany

• Source: Upper-Rhine Artificial Intelligence Symposium 2024 ; https://hal.science/hal-04729676 ; Upper-Rhine Artificial Intelligence Symposium 2024, Nov 2024, Offenburg, Germany

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