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GASS-Metal: identifying metal-binding sites on protein structures using genetic algorithms.

• Authors : Paiva, Vinícius A¹ (AUTHOR); Mendonça, Murillo V² (AUTHOR); Silveira, Sabrina A¹ (AUTHOR)

• Source: Briefings in Bioinformatics. Sep2022, Vol. 23 Issue 5, p1-9. 9p.

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Integrating genetic algorithms and language models for enhanced enzyme design

• Authors : Yves Gaetan Nana Teukam; Federico Zipoli; Teodoro Laino

Subjects: biocatalysis; enzyme optimization; computational protein design

• Source: Brief Bioinform

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Dual-stage optimizer for systematic overestimation adjustment applied to multi-objective genetic algorithms for biomarker selection

• Authors : Luca Cattelani; Vittorio Fortino

Subjects: FOS: Computer and information sciences; 0301 basic medicine; Computer Science - Machine Learning

• Source: Brief Bioinform

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TCMFP: a novel herbal formula prediction method based on network target's score integrated with semi-supervised learning genetic algorithms.

• Authors : Niu, Qikai¹ (AUTHOR); Li, Hongtao² (AUTHOR); Tong, Lin² (AUTHOR)

• Source: Briefings in Bioinformatics. May2023, Vol. 24 Issue 3, p1-16. 16p.

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Predicting disease trait with genomic data: a composite kernel approach.

• Authors : Haitao Yang^1,2; Shaoyu Li³; Hongyan Cao⁴

• Source: Briefings in Bioinformatics. Jul2017, Vol. 18 Issue 4, p591-601. 11p.

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Comparative evaluation of isoform-level gene expression estimation algorithms for RNA-seq and exon-array platforms.

• Authors : Dapas, Matthew¹; Kandpal, Manoj²; Yingtao Bi³

• Source: Briefings in Bioinformatics. Mar2017, Vol. 18 Issue 2, p260-269. 10p.

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Resolving the problem of multiple accessions of the same transcript deposited across various public databases.

• Authors : Weirick, Tyler¹; John, David¹; Uchida, Shizuka²

• Source: Briefings in Bioinformatics. Mar2017, Vol. 18 Issue 2, p226-235. 10p.

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Robust and exact structural variation detection with paired-end and soft-clipped alignments: SoftSV compared with eight algorithms.

• Authors : Bartenhagen, Christoph¹ ; Dugas, Martin²

• Source: Briefings in Bioinformatics. Jan2016, Vol. 17 Issue 1, p51-62. 12p.

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CRISPR-DIPOFF: an interpretable deep learning approach for CRISPR Cas-9 off-target prediction.

• Authors : Toufikuzzaman, Md; Samee, Md Abul Hassan; Rahman, M Sohel

Subjects: DEEP learning; RECURRENT neural networks; CRISPRS

• Source: Briefings in Bioinformatics; Mar2024, Vol. 25 Issue 2, p1-10, 10p

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Advances in metaheuristics for gene selection and classification of microarray data.

• Authors : Duval, Béatrice; Jin-Kao Hao

• Source: Briefings in Bioinformatics. Jan2010, Vol. 11 Issue 1, p127-141. 15p. 3 Diagrams, 1 Chart.

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