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Academic Journal

Enhanced prediction of hemolytic activity in antimicrobial peptides using deep learning-based sequence analysis.

  • Authors : Abdelbaky I; Artificial Intelligence Department, Faculty of Computers and Artificial Intelligence, Benha University, Benha, Egypt. .; Elhakeem M

Subjects: Deep Learning* ; Hemolysis*/Hemolysis*/Hemolysis*/drug effects ; Antimicrobial Peptides*/Antimicrobial Peptides*/Antimicrobial Peptides*/chemistry

  • Source: BMC bioinformatics [BMC Bioinformatics] 2024 Nov 27; Vol. 25 (1), pp. 368. Date of Electronic Publication: 2024 Nov Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Combining genetic algorithm with machine learning strategies for designing potent antimicrobial peptides.

  • Authors : Boone K; Bioengineering Program, University of Kansas, Institute of Bioengineering Research, University of Kansas, 1530 W 15th Street, Learned Hall, Room 5109, Lawrence, KS, 66045, USA.; Wisdom C

Subjects: Antimicrobial Cationic Peptides* ; Machine Learning*; Amino Acid Sequence

  • Source: BMC bioinformatics [BMC Bioinformatics] 2021 May 11; Vol. 22 (1), pp. 239. Date of Electronic Publication: 2021 May Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

An advanced approach to identify antimicrobial peptides and their function types for penaeus through machine learning strategies.

  • Authors : Lin Y; Department of Computer Science, School of Information Science and Technology, Xiamen University, Xiamen, 361005, China.; Sparebanken Vest, Jonsvollsgaten 2, 5011 Bergen, Bergen, 5058, Norway.

Subjects: Machine Learning*; Antimicrobial Cationic Peptides/Antimicrobial Cationic Peptides/Antimicrobial Cationic Peptides/*analysis ; Penaeidae/Penaeidae/Penaeidae/*metabolism

  • Source: BMC bioinformatics [BMC Bioinformatics] 2019 Jun 10; Vol. 20 (Suppl 8), pp. 291. Date of Electronic Publication: 2019 Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Incorporating significant amino acid pairs to identify O-linked glycosylation sites on transmembrane proteins and non-transmembrane proteins.

  • Authors : Chen SA; Department of Computer Science and Engineering, Yuan Ze University, Chungli 320, Taiwan.; Lee TY

Subjects: Glycoproteins/Glycoproteins/Glycoproteins/*chemistry ; Membrane Glycoproteins/Membrane Glycoproteins/Membrane Glycoproteins/*chemistry; Algorithms

  • Source: BMC bioinformatics [BMC Bioinformatics] 2010 Oct 29; Vol. 11, pp. 536. Date of Electronic Publication: 2010 Oct 29.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Reverse engineering gene regulatory network from microarray data using linear time-variant model.

  • Authors : Kabir M; Department of Computer Science and Engineering, University of Dhaka, Dhaka, Bangladesh. ; Noman N

Subjects: Gene Regulatory Networks*; Oligonucleotide Array Sequence Analysis/Oligonucleotide Array Sequence Analysis/Oligonucleotide Array Sequence Analysis/*methods; Cyclic AMP/Cyclic AMP/Cyclic AMP/metabolism

  • Source: BMC bioinformatics [BMC Bioinformatics] 2010 Jan 18; Vol. 11 Suppl 1, pp. S56. Date of Electronic Publication: 2010 Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Incorporating significant amino acid pairs to identify O-linked glycosylation sites on transmembrane proteins and nontransmembrane proteins.

Subjects: PROTEINS; AMINO acids; TOPOLOGY

  • Source: BMC Bioinformatics; 2010, Vol. 11, p536-548, 13p

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Academic Journal

Data recovery and integration from public databases uncovers transformation-specific transcriptional downregulation of cAMP-PKA pathway-encoding genes.

  • Authors : Balestrieri C; Department of Biotechnology and Biosciences, University of Milano-Bicocca, Piazza della Scienza 2, Milan, Italy. ; Alberghina L

Subjects: Databases, Genetic* ; Down-Regulation* ; Signal Transduction*

  • Source: BMC bioinformatics [BMC Bioinformatics] 2009 Oct 15; Vol. 10 Suppl 12, pp. S1. Date of Electronic Publication: 2009 Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Automatic generation of 3D motifs for classification of protein binding sites.

  • Authors : Nebel JC; Faculty of Computing, Information Systems & Mathematics, Kingston University, Kingston-upon-Thames, KT1 2EE, UK. ; Herzyk P

Subjects: Algorithms* ; Models, Chemical* ; Models, Molecular*

  • Source: BMC bioinformatics [BMC Bioinformatics] 2007 Aug 30; Vol. 8, pp. 321. Date of Electronic Publication: 2007 Aug 30.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Computational promoter analysis of mouse, rat and human antimicrobial peptide-coding genes.

  • Authors : Brahmachary M; Knowledge Extraction Laboratory, Institute for Infocomm Research, 21 Heng Mui Keng Terrace, Singapore 119613, Singapore. ; Schönbach C

Subjects: Promoter Regions, Genetic*; Antimicrobial Cationic Peptides/Antimicrobial Cationic Peptides/Antimicrobial Cationic Peptides/*genetics ; Computational Biology/Computational Biology/Computational Biology/*methods

  • Source: BMC bioinformatics [BMC Bioinformatics] 2006 Dec 18; Vol. 7 Suppl 5, pp. S8. Date of Electronic Publication: 2006 Dec Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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  • 1-9 ل  9 نتائج ل ""system &"