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Structure of UBE2K-Ub/E3/polyUb reveals mechanisms of K48-linked Ub chain extension

• Authors : Nakasone, Mark A; Majorek, Karolina A; Gabrielsen, Mads

Subjects: Polyubiquitin/metabolism; Protein Binding; Protein Domains

• Source: Nakasone , M A , Majorek , K A , Gabrielsen , M , Sibbet , G J , Smith , B O & Huang , D T 2022 , ' Structure of UBE2K-Ub/E3/polyUb reveals mechanisms of K48-linked Ub chain extension ' , Nature

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Validation and Applications of Protein-Ligand Docking Approaches Improved for Metalloligands with Multiple Vacant Sites

• Authors : Sciortino, Giuseppe; Garribba, Eugenio; Maréchal, Jean-Didier

Subjects: Binding Sites; Carboxypeptidases/chemistry; Cathepsin B/chemistry

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Chemically monoubiquitinated PEX5 binds to the components of the peroxisomal docking and export machinery

• Authors : Hagmann, V; Sommer, S; Fabian, P ...

Subjects: ATPases Associated with Diverse Cellular Activities / chemistry; ATPases Associated with Diverse Cellular Activities / genetics; Amino Acid Sequence / genetics

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Polyubiquitin-Photoactivatable Crosslinking Reagents for Mapping Ubiquitin Interactome Identify Rpn1 as a Proteasome Ubiquitin-Associating Subunit

• Authors : Chojnacki, Michal; Mansour, Wissam; Hameed, Dharjath S

Subjects: Binding Sites; Cross-Linking Reagents/chemistry; Molecular Docking Simulation

• Source: Chojnacki , M , Mansour , W , Hameed , D S , Singh , R K , El Oualid , F , Rosenzweig , R , Nakasone , M A , Yu , Z , Glaser , F , Kay , L E , Fushman , D , Ovaa , H & Glickman , M H 2017 , '

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Endothelial SIRT1 prevents adverse arterial remodeling by facilitating HERC2-mediated degradation of acetylated LKB1

• Authors : Bai, Bo; Man, Andy W C; Yang, Kangmin

Subjects: Blood vessel remodeling; Endothelial senescence; Gerotarget

• Source: Bai , B , Man , A W C , Yang , K , Guo , Y , Xu , C , Tse , H-F , Han , W , Bloksgaard , M , De Mey , J G R , Vanhoutte , P M , Xu , A & Wang , Y 2016 , ' Endothelial SIRT1 prevents adverse arterial

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Interface of the polarizable continuum model of solvation with semi-empirical methods in the GAMESS program

• Authors : Svendsen, Casper Steinmann; Blædel, Kristoffer; Christensen, Anders S

Subjects: Computer Simulation Gases Humans *Models; Chemical Plant Proteins/chemistry Quaternary Ammonium Compounds/chemistry *Software Solubility Solvents Static Electricity Thermodynamics Trypsin Inhibitors/chemistry Ubiquitin/*chemistry

• Source: Svendsen , C S , Blædel , K , Christensen , A S & Jensen , J H 2013 , ' Interface of the polarizable continuum model of solvation with semi-empirical methods in the GAMESS program ' , PLOS ONE , vol.

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Genome-wide YFP fluorescence complementation screen identifies new regulators for telomere signaling in human cells

• Authors : Ok-Hee Lee; Hyeung Kim; Quanyuan He

Subjects: Bacterial Proteins/chemistry; Flow Cytometry/methods; Genetic Complementation Test

• Source: T201103848.pdf

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Energetic determinants of protein binding specificity: insights into protein interaction networks

• Authors : Carbonell, P.; Nussinov, R.; DEL SOL MESA, Antonio

Subjects: Yeasts/metabolism; Computer Simulation; Cytochromes b/chemistry

• Source: Proteomics, 9 (7), 1744-53 (2009)

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System-Wide Modulation of HECT E3 Ligases with Selective Ubiquitin Variant Probes

• Authors : Emmanuel Lemichez; Brenda A. Schulman; Zhenyue Hao ...

Subjects: Models, Molecular; 0301 basic medicine; Subfamily

• Source: Molecular CellMolecular Cell, Elsevier, 2016, 62 (1), pp.121-136. ⟨10.1016/j.molcel.2016.02.005⟩

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How force unfolding differs from chemical denaturation

• Authors : Seung-gu Kang; Guillaume Stirnemann; Ruhong Zhou ...

Subjects: Protein Denaturation; Protein Folding; Protein Conformation

• Source: Proceedings of the National Academy of Sciences of the United States of AmericaProceedings of the National Academy of Sciences of the United States of America, National Academy of Sciences,

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