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An FPGA-based hardware accelerator supporting sensitive sequence homology filtering with profile hidden Markov models.

• Authors : Anderson T; Department of Computer Science, University of Montana, Missoula, MT, USA.; Wheeler TJ

Subjects: Markov Chains* ; Sequence Alignment*/Sequence Alignment*/Sequence Alignment*/methods; Computational Biology/Computational Biology/Computational Biology/methods

• Source: BMC bioinformatics [BMC Bioinformatics] 2024 Jul 29; Vol. 25 (1), pp. 247. Date of Electronic Publication: 2024 Jul 29.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Sequence homology score-based deep fuzzy network for identifying therapeutic peptides

• Authors : Guo, Xiaoyi; Zheng, Ziyu; Cheong, Kang Hao

Subjects: Biological sequence classification; Membership function; Mixture correntropy

• Source: Neural Networks. 178

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An FPGA-based hardware accelerator supporting sensitive sequence homology filtering with profile hidden Markov models

• Authors : Tim Anderson; Travis J. Wheeler

Subjects: FPGA; Sequence alignment; Profile hidden Markov model

• Source: BMC Bioinformatics, Vol 25, Iss 1, Pp 1-18 (2024)

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Identification of a Potential Entry-Fusion Complex Based on Sequence Homology of African Swine Fever and Vaccinia Virus.

• Authors : Urquiza J; Departamento de Biotecnología, INIA-CSIC, Centro Nacional Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Ctra. de la Coruña Km 7.5, 28040 Madrid, Spain.; Cuesta-Geijo MÁ

Subjects: African Swine Fever* ; African Swine Fever Virus*/African Swine Fever Virus*/African Swine Fever Virus*/genetics ; African Swine Fever Virus*/African Swine Fever Virus*/African Swine Fever Virus*/metabolism

• Source: Viruses [Viruses] 2024 Feb 23; Vol. 16 (3). Date of Electronic Publication: 2024 Feb 23.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101509722 Publication Model: Electronic Cited Medium: Internet ISSN: 1999-4915

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A Sequence Homology and Bioinformatic Approach Can Predict Candidate Targets for Immune Responses to SARS-CoV-2

• Authors : Grifoni, Alba; Sidney, John; Zhang, Yun

Subjects: Lung; Vaccine Related; Infectious Diseases

• Source: Cell Host & Microbe. 27(4)

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Identification of a Potential Entry-Fusion Complex Based on Sequence Homology of African Swine Fever and Vaccinia Virus

• Authors : European Commission; Ministerio de Ciencia e Innovación (España); Agencia Estatal de Investigación (España)

Subjects: African swine fever virus; ASFV; NCLDVs

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Cross-Reactivity and Sequence Homology Between Alpha-Synuclein and Food Products: A Step Further for Parkinson's Disease Synucleinopathy.

• Authors : Vojdani A; Immunosciences Laboratory, Inc., Los Angeles, CA 90035, USA.; Cyrex Laboratories, Phoenix, AZ 85034, USA.

Subjects: Antigen-Antibody Reactions* ; Sequence Homology, Amino Acid*; Allergens/Allergens/Allergens/*immunology

• Source: Cells [Cells] 2021 May 05; Vol. 10 (5). Date of Electronic Publication: 2021 May 05.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101600052 Publication Model: Electronic Cited Medium: Internet ISSN: 2073-4409

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Muscle5: High-accuracy alignment ensembles enable unbiased assessments of sequence homology and phylogeny

• Authors : Robert C. Edgar

Subjects: Science

• Source: Nature Communications, Vol 13, Iss 1, Pp 1-9 (2022)

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Identification of a Potential Entry-Fusion Complex Based on Sequence Homology of African Swine Fever and Vaccinia Virus

• Authors : Jesús Urquiza; Miguel Ángel Cuesta-Geijo; Isabel García-Dorival

Subjects: African swine fever virus; ASFV; NCLDVs

• Source: Viruses, Vol 16, Iss 3, p 349 (2024)

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CRISPRi for specific inhibition of miRNA clusters and miRNAs with high sequence homology

• Authors : Monika Drobna-Śledzińska; Natalia Maćkowska-Maślak; Roman Jaksik

Subjects: Medicine; Science

• Source: Scientific Reports, Vol 12, Iss 1, Pp 1-11 (2022)

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