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Sequence Alignment : Methods, Models, Concepts, and Strategies

• Authors : Michael S. Rosenberg Ph. D.

Subjects: Sequence alignment (Bioinformatics); Bioinformatics; Computational biologySCIENCE / Life Sciences / Evolution

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Protocol Reverse Analysis of Ethernet for Control Automation Technology Based on Sequence Alignment and Pearson Correlation Coefficient.

• Authors : Wang, Xiaopeng^1,2 (AUTHOR) ; Yao, Yu¹ (AUTHOR) ; Li, Zhongwei³ (AUTHOR)

• Source: Sensors (14248220). Dec2024, Vol. 24 Issue 24, p7922. 14p.

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Multi Activity Sequence Alignment via Implicit Clustering

• Authors : Kwon, Taein; Pataki, Zador; Rad, Mahdi

Subjects: Computer Science - Computer Vision and Pattern Recognition

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序列比对算法BWA的优化.

• Authors : 胡爽^1,2,3; 陈长波^1,3

• Source: Application Research of Computers / Jisuanji Yingyong Yanjiu. Dec2024, Vol. 41 Issue 12, p3777-3785. 9p.

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ARTEMIS: a method for topology-independent superposition of RNA 3D structures and structure-based sequence alignment.

• Authors : Bohdan, Davyd R¹ (AUTHOR) ; Bujnicki, Janusz M¹ (AUTHOR) ; Baulin, Eugene F¹ (AUTHOR)

Subjects: *RNA analysis; *NON-coding RNA; *CATALYTIC RNA

• Source: Nucleic Acids Research. 10/14/2024, Vol. 52 Issue 18, p10850-10861. 12p.

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Sequence Alignment-Based Prediction of Myosin 7A: Structural Implications and Protein Interactions.

• Authors : Yu, Chan Jong¹ (AUTHOR) ; Park, Yoon Ho¹ (AUTHOR) ; Ryu, Bumhan² (AUTHOR)

Subjects: *CYTOSKELETAL proteins; *PROTEIN-protein interactions; *MYOSIN

• Source: International Journal of Molecular Sciences. Mar2024, Vol. 25 Issue 6, p3365. 14p.

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Parallel DNA Sequence Alignment on High-Performance Systems with CUDA and MPI

• Authors : Zwaka, Linus

Subjects: Computer Science - Distributed, Parallel, and Cluster Computing

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Assessing opportunities of SYCL for biological sequence alignment on GPU-based systems.

• Authors : Costanzo, Manuel¹ (AUTHOR); Rucci, Enzo¹ (AUTHOR); García-Sanchez, Carlos² (AUTHOR)

• Source: Journal of Supercomputing. Jun2024, Vol. 80 Issue 9, p12599-12622. 24p.

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Optimizing Sequence Alignment with Scored NFAs

• Authors : Karbowniczak, Ryan; Karakchi, Rasha

Subjects: Computer Science - Emerging Technologies

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Analyzing the Performance Portability of SYCL across CPUs, GPUs, and Hybrid Systems with SW Sequence Alignment

• Authors : Costanzo, Manuel; Rucci, Enzo; García-Sánchez, Carlos

Subjects: Computer Science - Distributed, Parallel, and Cluster Computing

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