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An Integrated Approach Including CRISPR/Cas9-Mediated Nanopore Sequencing, Mate Pair Sequencing, and Cytogenomic Methods to Characterize Complex Structural Rearrangements in Acute Myeloid Leukemia

• Authors : Michael Phan; Maria A. Gomes; Victoria Stinnett

Subjects: CRISPR/Cas9; nanopore sequencing; mate pair sequencing

• Source: Biomedicines, Vol 12, Iss 3, p 598 (2024)

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Development and performance evaluation of whole-genome sequencing with paired-end and mate-pair strategies in molecular characterization of GM crops: One GM rice 114-7-2 line as an example

• Authors : Hanwen Zhang; Yuchen Zhang; Wenting Xu

Subjects: GM rice line 114-7-2; Mate pair; Molecular characterization

• Source: Food Chemistry: Molecular Sciences, Vol 4, Iss , Pp 100061- (2022)

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A de novo 10q11.23q22.1 deletion detected by whole genome mate-pair sequencing: a case report

• Authors : Dalin Fu; Weisheng Lin; Fen Lu

Subjects: Whole-genome mate-pair sequencing; 10q11-q22 deletion syndrome; Developmental delay

• Source: BMC Pediatrics, Vol 21, Iss 1, Pp 1-5 (2021)

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Whole-genome mate-pair sequencing of apparently balanced chromosome rearrangements reveals complex structural variations: two case studies

• Authors : Ya-Qi Tan; Yue-Qiu Tan; De-Hua Cheng

Subjects: Apparently balanced chromosome rearrangement; Complex chromosomal rearrangement; Cryptic breakpoint

• Source: Molecular Cytogenetics, Vol 13, Iss 1, Pp 1-6 (2020)

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Prenatal characterization of a novel inverted SMAD2 duplication by mate pair sequencing in a fetus with dextrocardia

• Authors : Cinthya J. Zepeda‐Mendoza; Anna Essendrup; Stephanie A. Smoley

Subjects: mate pair; SMAD2; duplication

• Source: Clinical Case Reports, Vol 9, Iss 2, Pp 769-774 (2021)

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Multiple Long Mate Pair Approaches to Facilitate Short read based de novo Genome Assembly

• Authors : Wei1, Chia-Lin

• Source: Conference: Sequencing, Finishing and Analysis in the Future Meeting, Santa Fe, New Mexico, June 5 - 7, 2012

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Assessment of Nextera Long Mate-Pair Libraries: A Rapid, Low-Input Method for Mate-Pair Library Construction Yields Improved Assemblies

• Authors : Hoover, Cindi A.; Eng, Kevin S.; Sun, Hui

Subjects: Illumina; Nextera Long Mate-Pair Libraries; Assemblies

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Multiple Long Mate Pair Approaches to Facilitate Short read based de novo Genome Assembly

• Authors : Chow, Julianna

Subjects: General and Miscellaneous; Multiple Long Mate Pair; Short Reads

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SVachra: a tool to identify genomic structural variation in mate pair sequencing data containing inward and outward facing reads

• Authors : Oliver A. Hampton; Adam C. English; Mark Wang

Subjects: Structural variation; Breakpoint discovery; Mate pair sequencing

• Source: BMC Genomics, Vol 18, Iss S6, Pp 31-36 (2017)

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Optimal Haplotype Assembly from High-Throughput Mate-Pair Reads

• Authors : Kamath, Govinda M.; Şaşoğlu, Eren; Tse, David

Subjects: Computer Science - Information Theory; Computer Science - Computational Engineering, Finance, and Science; Quantitative Biology - Genomics

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