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Editor's Note 'Transcription factor binding sites in the pol geneintragenic regulatory region of HIV-1 are important for virus infectivity'.

Subjects: *TRANSCRIPTION factors; *ARROWHEADS; *BINDING sites

• Source: Nucleic Acids Research. 1/13/2025, Vol. 53 Issue 1, p1-3. 3p.

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Genome-wide profiling of soybean WRINKLED1 transcription factor binding sites provides insight into seed storage lipid biosynthesis.

• Authors : Jo, Leonardo; Pelletier, Julie; Goldberg, Robert

Subjects: embryo; fatty acids; triacylglycerol

• Source: Proceedings of the National Academy of Sciences. 121(45)

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Predicting Transcription Factor Binding Sites with Deep Learning.

• Authors : Ghosh, Nimisha¹ (AUTHOR) ; Santoni, Daniele² (AUTHOR) ; Saha, Indrajit³ (AUTHOR)

Subjects: *BINDING sites; *TRANSCRIPTION factors; *MOLECULAR biology

• Source: International Journal of Molecular Sciences. May2024, Vol. 25 Issue 9, p4990. 14p.

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Predicting CTCF cell type active binding sites in human genome.

• Authors : Chai, Lu¹ (AUTHOR); Gao, Jie¹ (AUTHOR); Li, Zihan¹ (AUTHOR)

• Source: Scientific Reports. 12/30/2024, Vol. 14 Issue 1, p1-14. 14p.

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Two redundant transcription factor binding sites in a single enhancer are essential for mammalian sex determination.

• Authors : Ridnik, Meshi¹ (AUTHOR); Abberbock, Elisheva¹ (AUTHOR); Alipov, Veronica¹ (AUTHOR)

Subjects: *TRANSCRIPTION factors; *SEX determination; *BINDING sites

• Source: Nucleic Acids Research. 6/10/2024, Vol. 52 Issue 10, p5514-5528. 15p.

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miPEP31 alleviates Ang II-induced hypertension in mice by occupying Cebpα binding sites in the pri-miR-31 promoter.

• Authors : Li, Xiangxiao^1,2 (AUTHOR); Zhou, Hong² (AUTHOR); Lu, Pengfei² (AUTHOR)

• Source: Cardiovascular Diabetology. 7/11/2024, Vol. 23 Issue 1, p1-15. 15p.

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Genome-wide identification of ZmMYC2 binding sites and target genes in maize.

• Authors : Liu, Lijun^1,2 (AUTHOR); Zhang, Yuhan¹ (AUTHOR); Tang, Chen¹ (AUTHOR)

• Source: BMC Genomics. 4/23/2024, Vol. 25 Issue 1, p1-15. 15p.

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MLSNet: a deep learning model for predicting transcription factor binding sites.

• Authors : Zhang, Yuchuan¹ (AUTHOR); Wang, Zhikang² (AUTHOR); Ge, Fang³ (AUTHOR)

• Source: Briefings in Bioinformatics. Nov2024, Vol. 25 Issue 6, p1-10. 10p.

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Transcription factor interactions explain the context-dependent activity of CRX binding sites.

• Authors : Loell, Kaiser J.^1,2 (AUTHOR); Friedman, Ryan Z.^1,2 (AUTHOR); Myers, Connie A.³ (AUTHOR)

• Source: PLoS Computational Biology. 1/16/2024, Vol. 20 Issue 1, p1-25. 25p.

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Mapping protein binding sites by photoreactive fragment pharmacophores.

• Authors : Ábrányi-Balogh, Péter^1,2,3 (AUTHOR); Bajusz, Dávid^1,2 (AUTHOR); Orgován, Zoltán^1,2 (AUTHOR)

• Source: Communications Chemistry. 7/31/2024, p1-13. 13p.

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