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  • 1-10 ل  2,453 نتائج ل ""sequence alignment""
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Academic Journal

ARTEMIS: a method for topology-independent superposition of RNA 3D structures and structure-based sequence alignment.

  • Authors : Bohdan DR; International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland.; Bujnicki JM

Subjects: Nucleic Acid Conformation* ; Sequence Alignment*/Sequence Alignment*/Sequence Alignment*/methods ; Software*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Oct 14; Vol. 52 (18), pp. 10850-10861.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Sequence Flow: interactive web application for visualizing partial order alignments.

  • Authors : Zdąbłasz K; Institute of Informatics, University of Warsaw, Banacha 2, Warszawa, 02-097, Poland.; Lisiecka A

Subjects: Internet* ; Software* ; Sequence Alignment*/Sequence Alignment*/Sequence Alignment*/methods

  • Source: BMC genomics [BMC Genomics] 2024 Oct 16; Vol. 25 (1), pp. 973. Date of Electronic Publication: 2024 Oct 16.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Academic Journal

SigAlign: an alignment algorithm guided by explicit similarity criteria.

  • Authors : Bahk K; Interdisciplinary Program in Bioinformatics, College of Natural Sciences, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Korea.; Sung J

Subjects: Algorithms* ; Sequence Alignment*/Sequence Alignment*/Sequence Alignment*/methods ; Software*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Aug 27; Vol. 52 (15), pp. 8717-8733.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

RNAhugs web server for customized 3D RNA structure alignment.

  • Authors : Zurkowski M; Institute of Computing Science and European Centre for Bioinformatics and Genomics, Poznan University of Technology, Piotrowo 2, 60-965 Poznan, Poland.; Swiercz M

Subjects: Software* ; Nucleic Acid Conformation* ; Internet*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W348-W353.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

PxBLAT: an efficient python binding library for BLAT.

  • Authors : Li Y; Department of Urology, Northwestern University Feinberg School of Medicine, 303 E Superior St, Chicago, IL, 60611, USA.; Yang R

Subjects: Software* ; Computational Biology*/Computational Biology*/Computational Biology*/methods ; Sequence Alignment*/Sequence Alignment*/Sequence Alignment*/methods

  • Source: BMC bioinformatics [BMC Bioinformatics] 2024 Jun 19; Vol. 25 (1), pp. 219. Date of Electronic Publication: 2024 Jun 19.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Abalign: a comprehensive multiple sequence alignment platform for B-cell receptor immune repertoires.

  • Authors : Zong F; Center of Growth, Metabolism and Aging, Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, China.; Animal Disease Prevention and Food Safety Key Laboratory of Sichuan Province, Microbiology and Metabolic Engineering Key Laboratory of Sichuan Province, Chengdu, China.

Subjects: Antibodies*/Antibodies*/Antibodies*/genetics ; Software*; Sequence Alignment

  • Source: Nucleic acids research [Nucleic Acids Res] 2023 Jul 05; Vol. 51 (W1), pp. W17-W24.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

TreeWave: command line tool for alignment-free phylogeny reconstruction based on graphical representation of DNA sequences and genomic signal processing.

  • Authors : Boumajdi N; Laboratory of Biotechnology (MedBiotech), Rabat Medical & Pharmacy School, Bioinova Research Center, Mohammed V University in Rabat, Rabat, Morocco.; Bendani H

Subjects: Phylogeny* ; Software* ; Algorithms*

  • Source: BMC bioinformatics [BMC Bioinformatics] 2024 Nov 27; Vol. 25 (1), pp. 367. Date of Electronic Publication: 2024 Nov 27.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

CUDASW++4.0: ultra-fast GPU-based Smith-Waterman protein sequence database search.

  • Authors : Schmidt B; Department of Computer Science, Johannes Gutenberg University Mainz, Mainz, Germany. .; Kallenborn F

Subjects: Algorithms* ; Software* ; Databases, Protein*

  • Source: BMC bioinformatics [BMC Bioinformatics] 2024 Nov 02; Vol. 25 (1), pp. 342. Date of Electronic Publication: 2024 Nov 02.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

ggmsa: a visual exploration tool for multiple sequence alignment and associated data.

  • Authors : Zhou L; Department of Bioinformatics, School of Basic Medical Sciences, Southern Medical University, Guangzhou, China.; Division of Laboratory Medicine, Microbiome Medicine Center, Zhujiang Hospital, Southern Medical University, Guangzhou, China.

Subjects: Genome* ; Software*; Amino Acid Sequence

  • Source: Briefings in bioinformatics [Brief Bioinform] 2022 Jul 18; Vol. 23 (4).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

SingmiR: a single-cell miRNA alignment and analysis tool.

  • Authors : Engel A; Chair for Clinical Bioinformatics, Saarland University, 66123 Saarbrücken, Germany.; Rishik S

Subjects: MicroRNAs*/MicroRNAs*/MicroRNAs*/genetics ; MicroRNAs*/MicroRNAs*/MicroRNAs*/metabolism ; Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W374-W380.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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  • 1-10 ل  2,453 نتائج ل ""sequence alignment""