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  • 1-10 ل  1,581 نتائج ل ""PROTEIN conformation""
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Academic Journal

MuToN Quantifies Binding Affinity Changes upon Protein Mutations by Geometric Deep Learning.

  • Authors : Li P; Department of Biomedical Engineering, School of Control Science and Engineering, Shandong University, Jinan, Shandong, 250061, China.; Liu ZP

Subjects: Software* ; Protein Conformation* ; Proteins*/Proteins*/Proteins*/chemistry

  • Source: Advanced science (Weinheim, Baden-Wurttemberg, Germany) [Adv Sci (Weinh)] 2024 Sep; Vol. 11 (35), pp. e2402918. Date of Electronic Publication: 2024 Jul 12.Publisher: WILEY-VCH Country of Publication: Germany NLM ID: 101664569 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2198-3844

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Academic Journal

MutationExplorer: a webserver for mutation of proteins and 3D visualization of energetic impacts.

  • Authors : Philipp M; Image and Signal Processing Group, Department of Computer Science, Leipzig University, Augustusplatz 10, 04109 Leipzig, Germany.; Moth CW

Subjects: Internet* ; Software* ; Mutation*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W132-W139.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

AlphaKnot 2.0: a web server for the visualization of proteins' knotting and a database of knotted AlphaFold-predicted models.

  • Authors : Rubach P; Warsaw School of Economics, Al. Niepodleglosci 162, 02-554 Warsaw, Poland.; Sikora M

Subjects: Internet* ; Software* ; Databases, Protein*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W187-W193.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Proscan: a structure-based proline design web server.

  • Authors : Felbinger N; University of Maryland Institute for Bioscience and Biotechnology Research, Rockville, MD 20850, USA.; Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA.

Subjects: Proline*/Proline*/Proline*/chemistry ; Software* ; Internet*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W280-W286.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

PACSAB Server: A Web-Based Tool for the Study of Aggregation and the Conformational Ensemble of Disordered and Folded Proteins.

  • Authors : Emperador A; Department of Physics, Universitat Politècnica de Catalunya, B4-B5 Campus Nord, Jordi Girona 1-3, 08034 Barcelona, Spain.

Subjects: Software* ; Internet* ; Protein Folding*

  • Source: International journal of molecular sciences [Int J Mol Sci] 2024 May 30; Vol. 25 (11). Date of Electronic Publication: 2024 May 30.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Academic Journal

PYTHIA: Deep Learning Approach for Local Protein Conformation Prediction.

  • Authors : Cretin G; Biologie Intégrée du Globule Rouge, Université de Paris, UMR_S1134, BIGR, INSERM, 75015 Paris, France.; Laboratoire d'Excellence GR-Ex, 75015 Paris, France.

Subjects: Algorithms* ; Deep Learning* ; Neural Networks, Computer*

  • Source: International journal of molecular sciences [Int J Mol Sci] 2021 Aug 17; Vol. 22 (16). Date of Electronic Publication: 2021 Aug 17.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Academic Journal

AggreProt: a web server for predicting and engineering aggregation prone regions in proteins.

  • Authors : Planas-Iglesias J; Loschmidt Laboratories, Department of Experimental Biology and RECETOX, Faculty of Science, Masaryk University, Brno, Czech Republic.; International Clinical Research Center, St. Anne's University Hospital Brno, Brno, Czech Republic.

Subjects: Software* ; Internet* ; Protein Aggregates*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W159-W169.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

GPSFun: geometry-aware protein sequence function predictions with language models.

  • Authors : Yuan Q; School of Computer Science and Engineering, Sun Yat-sen University, Guangzhou, Guangdong 510000, China.; Tian C

Subjects: Software* ; Proteins*/Proteins*/Proteins*/chemistry ; Proteins*/Proteins*/Proteins*/metabolism

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W248-W255.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

The Damietta Server: a comprehensive protein design toolkit.

  • Authors : Grin I; Interfaculty Institute of Microbiology and Infection Medicine (IMIT), University of Tübingen, Tübingen, Germany.; Maksymenko K

Subjects: Software* ; Proteins*/Proteins*/Proteins*/chemistry ; Internet*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W200-W206.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

PROSCA: an online platform for humanized scaffold mining facilitating rational protein engineering.

  • Authors : Wang X; Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, School of Pharmaceutical Sciences, Chongqing University, Chongqing 401331, China.; Department of Intensive Care Medicine, Army Medical Center of PLA, Chongqing 401331, China.

Subjects: Protein Engineering*/Protein Engineering*/Protein Engineering*/methods ; Software*; Humans

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W272-W279.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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