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  • 1-10 ل  3,903 نتائج ل ""Databases, Protein""
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Academic Journal

InterPro: the protein sequence classification resource in 2025.

  • Authors : Blum M; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton CB10 1SD, UK.; Andreeva A

Subjects: Databases, Protein* ; Software* ; Sequence Analysis, Protein*

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 06; Vol. 53 (D1), pp. D444-D456.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Complex portal 2025: predicted human complexes and enhanced visualisation tools for the comparison of orthologous and paralogous complexes.

  • Authors : Balu S; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK.; Huget S

Subjects: Databases, Protein* ; Software*; Humans

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 06; Vol. 53 (D1), pp. D644-D650.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Prediction of Protein Secondary Structures Based on Substructural Descriptors of Molecular Fragments.

  • Authors : Zakharov OS; Department of Bioinformatics, Pirogov Russian National Research Medical University, 117997 Moscow, Russia.; Rudik AV

Subjects: Proteins*/Proteins*/Proteins*/chemistry ; Databases, Protein* ; Protein Structure, Secondary*

  • Source: International journal of molecular sciences [Int J Mol Sci] 2024 Nov 21; Vol. 25 (23). Date of Electronic Publication: 2024 Nov 21.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Academic Journal

CUDASW++4.0: ultra-fast GPU-based Smith-Waterman protein sequence database search.

  • Authors : Schmidt B; Department of Computer Science, Johannes Gutenberg University Mainz, Mainz, Germany. .; Kallenborn F

Subjects: Algorithms* ; Software* ; Databases, Protein*

  • Source: BMC bioinformatics [BMC Bioinformatics] 2024 Nov 02; Vol. 25 (1), pp. 342. Date of Electronic Publication: 2024 Nov 02.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

AlphaKnot 2.0: a web server for the visualization of proteins' knotting and a database of knotted AlphaFold-predicted models.

  • Authors : Rubach P; Warsaw School of Economics, Al. Niepodleglosci 162, 02-554 Warsaw, Poland.; Sikora M

Subjects: Internet* ; Software* ; Databases, Protein*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W187-W193.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

AlphaFind: discover structure similarity across the proteome in AlphaFold DB.

Subjects: Proteome*/Proteome*/Proteome*/chemistry ; Proteome*/Proteome*/Proteome*/genetics ; Databases, Protein*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W182-W186.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

CASTpFold: Computed Atlas of Surface Topography of the universe of protein Folds.

  • Authors : Ye B; Center for Bioinformatics and Quantitative Biology, and Richard and Loan Hill Department of Bioengineering, University of Illinois at Chicago, Chicago, IL 60607, USA.; Tian W

Subjects: Software* ; Databases, Protein* ; Protein Folding*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W194-W199.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

PypKa server: online pKa predictions and biomolecular structure preparation with precomputed data from PDB and AlphaFold DB.

  • Authors : Reis PBPS; BioISI - Instituto de Biossistemas e Ciências Integrativas, Faculdade de Ciências, Universidade de Lisboa, 1749-016 Lisboa, Portugal.; Machine Learning Research, Bayer AG, Müllerstraße 178, 13353 Berlin, Germany.

Subjects: Software* ; Internet* ; Molecular Dynamics Simulation*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W294-W298.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

ProTaxoVis-protein taxonomic visualisation of presence.

  • Authors : Hsieh YC; Department of Arctic and Marine Biology, Faculty of Biosciences, Fisheries and Economics, UiT Arctic University of Norway, 9037, Tromsø, Norway.; Bockwoldt M

Subjects: Software* ; Proteins*/Proteins*/Proteins*/classification ; Proteins*/Proteins*/Proteins*/chemistry

  • Source: BMC bioinformatics [BMC Bioinformatics] 2025 May 19; Vol. 26 (1), pp. 128. Date of Electronic Publication: 2025 May 19.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

PUNCH2: Explore the strategy for intrinsically disordered protein predictor.

  • Authors : Meng D; School of Computer Science, University College Dublin, Dublin, Ireland.; Pollastri G

Subjects: Intrinsically Disordered Proteins*/Intrinsically Disordered Proteins*/Intrinsically Disordered Proteins*/chemistry ; Computational Biology*/Computational Biology*/Computational Biology*/methods ; Software*

  • Source: PloS one [PLoS One] 2025 Mar 26; Vol. 20 (3), pp. e0319208. Date of Electronic Publication: 2025 Mar 26 (Print Publication: 2025).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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  • 1-10 ل  3,903 نتائج ل ""Databases, Protein""