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Academic Journal

Cross-Reactivity and Sequence Homology Between Alpha-Synuclein and Food Products: A Step Further for Parkinson's Disease Synucleinopathy.

  • Authors : Vojdani A; Immunosciences Laboratory, Inc., Los Angeles, CA 90035, USA.; Cyrex Laboratories, Phoenix, AZ 85034, USA.

Subjects: Antigen-Antibody Reactions* ; Sequence Homology, Amino Acid*; Allergens/Allergens/Allergens/*immunology

  • Source: Cells [Cells] 2021 May 05; Vol. 10 (5). Date of Electronic Publication: 2021 May 05.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101600052 Publication Model: Electronic Cited Medium: Internet ISSN: 2073-4409

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Academic Journal

Application of Homology Modeling by Enhanced Profile-Profile Alignment and Flexible-Fitting Simulation to Cryo-EM Based Structure Determination.

  • Authors : Yamamori Y; Artificial Intelligence Research Center (AIRC), National Institute of Advanced Industrial Science and Technology (AIST), 2-4-7 Aomi, Koto-ku, Tokyo 135-0064, Japan.; Tomii K

Subjects: Protein Conformation* ; Sequence Alignment* ; Sequence Homology, Amino Acid*

  • Source: International journal of molecular sciences [Int J Mol Sci] 2022 Feb 10; Vol. 23 (4). Date of Electronic Publication: 2022 Feb 10.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Academic Journal

The Plasmodium NOT1-G paralogue is an essential regulator of sexual stage maturation and parasite transmission.

  • Authors : Hart KJ; Department of Biochemistry and Molecular Biology, The Huck Center for Malaria Research, Pennsylvania State University, University Park, Pennsylvania, United States of America.; Power BJ

Subjects: Life Cycle Stages* ; Sequence Homology, Amino Acid*; Parasites/Parasites/Parasites/*growth & development

  • Source: PLoS biology [PLoS Biol] 2021 Oct 21; Vol. 19 (10), pp. e3001434. Date of Electronic Publication: 2021 Oct 21 (Print Publication: 2021).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101183755 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Sequence homology between HLA-bound cytomegalovirus and human peptides: A potential trigger for alloreactivity.

  • Authors : Hall CE; Bone Marrow Transplant Program, Massey Cancer Center, Virginia Commonwealth University, Richmond, Virginia, United States of America.; Koparde VN

Subjects: Sequence Homology, Amino Acid*; Cytomegalovirus/Cytomegalovirus/Cytomegalovirus/*metabolism ; Graft vs Host Disease/Graft vs Host Disease/Graft vs Host Disease/*immunology

  • Source: PloS one [PLoS One] 2017 Aug 11; Vol. 12 (8), pp. e0178763. Date of Electronic Publication: 2017 Aug 11 (Print Publication: 2017).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Triple null mutations in starch synthase SSIIa gene homoeologs lead to high amylose and resistant starch in hexaploid wheat.

  • Authors : Schoen A; Department of Plant Science and Landscape Architecture, University of Maryland, College Park, MD, 20742, USA.; Joshi A

Subjects: Polyploidy* ; Sequence Homology, Amino Acid*; Amylose/Amylose/Amylose/*metabolism

  • Source: BMC plant biology [BMC Plant Biol] 2021 Feb 03; Vol. 21 (1), pp. 74. Date of Electronic Publication: 2021 Feb 03.Publisher: BioMed Central Country of Publication: England NLM ID: 100967807 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2229

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Academic Journal

The S. pombe CDK5 Orthologue Pef1 Cooperates with Three Cyclins, Clg1, Pas1 and Psl1, to Promote Pre-Meiotic DNA Replication.

  • Authors : Matsuda S; Biosignal Research Center, Kobe University, 1-1, Rokkodai-cho, Nada-ku, Kobe 657-8501, Japan.; Department of Pharmaceutical Sciences, University of Shizuoka, 52-1 Yada, Suruga-ku, Shizuoka 422-8526, Japan.

Subjects: DNA Replication* ; Meiosis* ; Sequence Homology, Amino Acid*

  • Source: Biomolecules [Biomolecules] 2021 Jan 12; Vol. 11 (1). Date of Electronic Publication: 2021 Jan 12.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101596414 Publication Model: Electronic Cited Medium: Internet ISSN: 2218-273X

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Academic Journal

Improving homology modeling from low-sequence identity templates in Rosetta: A case study in GPCRs.

  • Authors : Bender BJ; Department of Pharmacology, Department of Chemistry, and Center for Structural Biology, Vanderbilt University, Nashville, Tennessee, United States of America.; Marlow B

Subjects: Models, Molecular* ; Receptors, G-Protein-Coupled*/Receptors, G-Protein-Coupled*/Receptors, G-Protein-Coupled*/chemistry ; Receptors, G-Protein-Coupled*/Receptors, G-Protein-Coupled*/Receptors, G-Protein-Coupled*/genetics

  • Source: PLoS computational biology [PLoS Comput Biol] 2020 Oct 28; Vol. 16 (10), pp. e1007597. Date of Electronic Publication: 2020 Oct 28 (Print Publication: 2020).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Implementation of homology based and non-homology based computational methods for the identification and annotation of orphan enzymes: using Mycobacterium tuberculosis H37Rv as a case study.

  • Authors : Sinha S; Bioinformatics Institute, Agency for Science, Technology, and Research (A*Star), 30 Biopolis Street, #07-01 Matrix, Singapore, 138671, Republic of Singapore.; Lynn AM

Subjects: Sequence Homology, Amino Acid*; Bacterial Proteins/Bacterial Proteins/Bacterial Proteins/*genetics ; Computational Biology/Computational Biology/Computational Biology/*methods

  • Source: BMC bioinformatics [BMC Bioinformatics] 2020 Oct 19; Vol. 21 (1), pp. 466. Date of Electronic Publication: 2020 Oct 19.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Molecular evolution of the ATP-binding cassette subfamily G member 2 gene subfamily and its paralogs in birds.

  • Authors : Ma S; Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, Sichuan Agricultural University, Chengdu, Sichuan, 611130, P.R. China.; Liu H

Subjects: Evolution, Molecular* ; Sequence Homology, Amino Acid*; ATP Binding Cassette Transporter, Subfamily G, Member 2/ATP Binding Cassette Transporter, Subfamily G, Member 2/ATP Binding Cassette Transporter, Subfamily G, Member 2/*genetics

  • Source: BMC evolutionary biology [BMC Evol Biol] 2020 Jul 14; Vol. 20 (1), pp. 85. Date of Electronic Publication: 2020 Jul 14.Publisher: BioMed Central Country of Publication: England NLM ID: 100966975 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2148

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Academic Journal

Hup-Type Hydrogenases of Purple Bacteria: Homology Modeling and Computational Assessment of Biotechnological Potential.

  • Authors : Abdullatypov AV; Institute of Basic Biological Problems of the Russian Academy of Sciences-A Separate Subdivision of PSCBR RAS (IBBP RAS), Institutskaya str., 2, Pushchino, 142290 Moscow, Russia.

Subjects: Molecular Dynamics Simulation* ; Sequence Homology, Amino Acid*; Bacterial Proteins/Bacterial Proteins/Bacterial Proteins/*chemistry

  • Source: International journal of molecular sciences [Int J Mol Sci] 2020 Jan 06; Vol. 21 (1). Date of Electronic Publication: 2020 Jan 06.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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