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  • 1-10 ل  24 نتائج ل ""transcriptome reconstruction""

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Subject : sequence analysis, rna
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Academic Journal

Ryūtō: network-flow based transcriptome reconstruction.

  • Authors : Gatter T; Bioinformatics Group, Department of Computer Science & Interdisciplinary Center for Bioinformatics, Universität Leipzig, Härtelstraße 16-18, Leipzig, 04107, Germany. .; Stadler PF

Subjects: RNA, Messenger*/RNA, Messenger*/RNA, Messenger*/analysis ; RNA, Messenger*/RNA, Messenger*/RNA, Messenger*/genetics; Computational Biology/Computational Biology/Computational Biology/*methods

  • Source: BMC bioinformatics [BMC Bioinformatics] 2019 Apr 16; Vol. 20 (1), pp. 190. Date of Electronic Publication: 2019 Apr 16.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Ryūtō: network-flow based transcriptome reconstruction

Subjects: Transcript reconstruction; Sequence Analysis, RNA; Gene Expression Profiling

  • Source: BMC Bioinformatics

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Comparative study of de novo assembly and genome-guided assembly strategies for transcriptome reconstruction based on RNA-Seq

Subjects: Sequence assembly; RNA-Seq; Computational biology

  • Source: Science China Life Sciences. 56:143-155

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Transcriptome reconstruction and annotation of cynomolgus and African green monkey

Subjects: FOS: Computer and information sciences; Bioinformatics; Annotation

  • Source: BMC Genomics

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Full-length transcriptome reconstruction reveals a large diversity of RNA and protein isoforms in rat hippocampus

Subjects: 0301 basic medicine; Protein isoform; Science

  • Source: Nature Communications, Vol 10, Iss 1, Pp 1-15 (2019)Nat. Commun.Nature Communications

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Inferring bona fide transfrags in RNA-Seq derived-transcriptome assemblies of non-model organisms

Subjects: Coding potential; Annotation; De novo transcriptome assembly

  • Source: BMC Bioinformatics

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Academic Journal

Understanding the molecular mechanisms underlying the effects of light intensity on flavonoid production by RNA-seq analysis in Epimedium pseudowushanense B.L.Guo.

  • Authors : Pan J; Key Laboratory of Bioactive Substances and Resources Utilization of Chinese Herbal Medicine from Ministry of Education, Beijing, P.R. China.; Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, P.R. China.

Subjects: Light* ; Sequence Analysis, RNA*; Epimedium/Epimedium/Epimedium/*genetics

  • Source: PloS one [PLoS One] 2017 Aug 07; Vol. 12 (8), pp. e0182348. Date of Electronic Publication: 2017 Aug 07 (Print Publication: 2017).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Transcriptome assembly and quantification from Ion Torrent RNA-Seq data.

Subjects: Transcriptome*; High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/*methods ; Sequence Analysis, RNA/Sequence Analysis, RNA/Sequence Analysis, RNA/*methods

  • Source: BMC genomics [BMC Genomics] 2014; Vol. 15 Suppl 5, pp. S7. Date of Electronic Publication: 2014 Jul 14.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Prediction of novel long non-coding RNAs based on RNA-Seq data of mouse Klf1 knockout study.

  • Authors : Sun L; School of Information and Electrical Engineering, China University of Mining and Technology, Xuzhou, JiangSu 221008, PR China.; Zhang Z

Subjects: Computational Biology/Computational Biology/Computational Biology/*methods ; RNA, Long Noncoding/RNA, Long Noncoding/RNA, Long Noncoding/*genetics ; Sequence Analysis, RNA/Sequence Analysis, RNA/Sequence Analysis, RNA/*methods

  • Source: BMC bioinformatics [BMC Bioinformatics] 2012 Dec 13; Vol. 13, pp. 331. Date of Electronic Publication: 2012 Dec 13.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Computational methods for transcriptome annotation and quantification using RNA-seq.

  • Authors : Garber M; Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, Massachusetts, USA. ; Grabherr MG

Subjects: Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/*statistics & numerical data ; High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/*statistics & numerical data ; Sequence Analysis, RNA/Sequence Analysis, RNA/Sequence Analysis, RNA/*statistics & numerical data

  • Source: Nature methods [Nat Methods] 2011 Jun; Vol. 8 (6), pp. 469-77. Date of Electronic Publication: 2011 May 27.Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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  • 1-10 ل  24 نتائج ل ""transcriptome reconstruction""