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  • 1-10 ل  694 نتائج ل ""Shotgun sequencing""

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Subject : sequence analysis, dna
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Academic Journal

Modeling of shotgun sequencing of DNA plasmids using experimental and theoretical approaches.

  • Authors : Shityakov S; Department of Bioinformatics, University of Würzburg, 97074, Würzburg, Germany. .; Department of Psychiatry, China Medical University Hospital, 404, Taichung, Taiwan. .

Subjects: High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/*methods ; Sequence Analysis, DNA/Sequence Analysis, DNA/Sequence Analysis, DNA/*methods; Algorithms

  • Source: BMC bioinformatics [BMC Bioinformatics] 2020 Apr 03; Vol. 21 (1), pp. 132. Date of Electronic Publication: 2020 Apr 03.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Application of metagenomic shotgun sequencing to detect vector-borne pathogens in clinical blood samples.

  • Authors : Vijayvargiya P; Division of Infectious Diseases, Mayo Clinic, Rochester, Minnesota, United States of America.; Jeraldo PR

Subjects: Disease Vectors* ; Metagenomics* ; Sequence Analysis, DNA*

  • Source: PloS one [PLoS One] 2019 Oct 02; Vol. 14 (10), pp. e0222915. Date of Electronic Publication: 2019 Oct 02 (Print Publication: 2019).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

McClintock: An Integrated Pipeline for Detecting Transposable Element Insertions in Whole-Genome Shotgun Sequencing Data.

  • Authors : Nelson MG; Faculty of Life Sciences, University of Manchester, M13 9PL, United Kingdom.; Linheiro RS

Subjects: Genome* ; Sequence Analysis, DNA* ; Software*

  • Source: G3 (Bethesda, Md.) [G3 (Bethesda)] 2017 Aug 07; Vol. 7 (8), pp. 2763-2778. Date of Electronic Publication: 2017 Aug 07.Publisher: Oxford University Press Country of Publication: England NLM ID: 101566598 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Uncovering Trophic Interactions in Arthropod Predators through DNA Shotgun-Sequencing of Gut Contents.

  • Authors : Paula DP; Embrapa Genetic Resources and Biotechnology, Parque Estação Biológica, Brasília, Brazil.; Department of Life Sciences, Natural History Museum, Cromwell Rd, London, United Kingdom.

Subjects: Food Chain*; Coleoptera/Coleoptera/Coleoptera/*physiology ; Gastrointestinal Contents/Gastrointestinal Contents/Gastrointestinal Contents/*chemistry

  • Source: PloS one [PLoS One] 2016 Sep 13; Vol. 11 (9), pp. e0161841. Date of Electronic Publication: 2016 Sep 13 (Print Publication: 2016).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Low-depth shotgun sequencing resolves complete mitochondrial genome sequence of Labeo rohita.

  • Authors : Das SP; a ICAR - Central Institute of Freshwater Aquaculture , Kausalyaganga , Bhubaneswar , Odisha , India .; Bit A

Subjects: Cyprinidae/Cyprinidae/Cyprinidae/*genetics ; High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/*methods ; Mitochondria/Mitochondria/Mitochondria/*genetics

  • Source: Mitochondrial DNA. Part A, DNA mapping, sequencing, and analysis [Mitochondrial DNA A DNA Mapp Seq Anal] 2016 Sep; Vol. 27 (5), pp. 3517-8. Date of Publisher: Taylor & Francis Group Country of Publication: England NLM ID: 101679980 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Colorectal Cancer and the Human Gut Microbiome: Reproducibility with Whole-Genome Shotgun Sequencing.

  • Authors : Vogtmann E; Division of Cancer Epidemiology & Genetics, National Cancer Institute, Bethesda, Maryland, United States of America.; Division of Cancer Prevention, National Cancer Institute, Bethesda, Maryland, United States of America.

Subjects: Sequence Analysis, DNA*; Colorectal Neoplasms/Colorectal Neoplasms/Colorectal Neoplasms/*genetics ; Colorectal Neoplasms/Colorectal Neoplasms/Colorectal Neoplasms/*microbiology

  • Source: PloS one [PLoS One] 2016 May 12; Vol. 11 (5), pp. e0155362. Date of Electronic Publication: 2016 May 12 (Print Publication: 2016).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

False positives complicate ancient pathogen identifications using high-throughput shotgun sequencing.

  • Authors : Campana MG; Department of Human Evolutionary Biology, Harvard University, Peabody Museum, 11 Divinity Avenue, Cambridge, MA 02138, USA. .; Robles García N

Subjects: Bacteria/Bacteria/Bacteria/*genetics ; High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/*methods ; Sequence Analysis, DNA/Sequence Analysis, DNA/Sequence Analysis, DNA/*methods

  • Source: BMC research notes [BMC Res Notes] 2014 Feb 25; Vol. 7, pp. 111. Date of Electronic Publication: 2014 Feb 25.Publisher: Biomed Central Country of Publication: England NLM ID: 101462768 Publication Model: Electronic Cited Medium: Internet ISSN: 1756-0500

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Academic Journal

Near-optimal assembly for shotgun sequencing with noisy reads.

Subjects: Algorithms* ; Genome*; Genomics/Genomics/Genomics/*methods

  • Source: BMC bioinformatics [BMC Bioinformatics] 2014; Vol. 15 Suppl 9, pp. S4. Date of Electronic Publication: 2014 Sep 10.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Analysis of the intestinal microbiota using SOLiD 16S rRNA gene sequencing and SOLiD shotgun sequencing.

Subjects: Feces/Feces/Feces/*microbiology ; Microbiota/Microbiota/Microbiota/*genetics ; RNA, Ribosomal, 16S/RNA, Ribosomal, 16S/RNA, Ribosomal, 16S/*genetics

  • Source: BMC genomics [BMC Genomics] 2013; Vol. 14 Suppl 5, pp. S16. Date of Electronic Publication: 2013 Oct 16.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Academic Journal

Optimal assembly for high throughput shotgun sequencing.

Subjects: Algorithms*; High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/High-Throughput Nucleotide Sequencing/*methods ; Sequence Analysis, DNA/Sequence Analysis, DNA/Sequence Analysis, DNA/*methods

  • Source: BMC bioinformatics [BMC Bioinformatics] 2013; Vol. 14 Suppl 5, pp. S18. Date of Electronic Publication: 2013 Jul 09.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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  • 1-10 ل  694 نتائج ل ""Shotgun sequencing""