نتائج البحث

Identification and control for the effects of bioinformatic globin depletion on human RNA-seq differential expression analysis.

• Authors : Sheerin D; Infectious Diseases and Immune Defence Division, The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC, 3052, Australia. .; Department of Medical Biology, The University of Melbourne, Parkville, VIC, Australia. .

Subjects: Gene Expression Profiling*/Gene Expression Profiling*/Gene Expression Profiling*/methods ; Hemoglobins*/Hemoglobins*/Hemoglobins*/genetics ; RNA*/RNA*/RNA*/genetics

• Source: Scientific reports [Sci Rep] 2023 Feb 01; Vol. 13 (1), pp. 1859. Date of Electronic Publication: 2023 Feb 01.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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scDEA: differential expression analysis in single-cell RNA-sequencing data via ensemble learning.

• Authors : Li HS; School of Mathematics and Statistics, Central China Normal University, China.; Ou-Yang L

Subjects: RNA*/RNA*/RNA*/genetics ; Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods; Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/methods

• Source: Briefings in bioinformatics [Brief Bioinform] 2022 Jan 17; Vol. 23 (1).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN:

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Benchmarking RNA-seq differential expression analysis methods using spike-in and simulation data.

• Authors : Baik B; Department of Biological Sciences, Ulsan National Institute of Science and Technology, Ulsan, Republic of Korea.; Yoon S

Subjects: Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/*methods ; RNA/RNA/RNA/*genetics ; RNA-Seq/RNA-Seq/RNA-Seq/*methods

• Source: PloS one [PLoS One] 2020 Apr 30; Vol. 15 (4), pp. e0232271. Date of Electronic Publication: 2020 Apr 30 (Print Publication: 2020).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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A fuzzy method for RNA-Seq differential expression analysis in presence of multireads.

• Authors : Consiglio A; Institute for Biomedical Technologies of Bari - ITB, National Research Council, Bari, 70126, Italy. .; Mencar C

Subjects: Computational Biology/Computational Biology/Computational Biology/*methods ; Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/*methods ; RNA/RNA/RNA/*genetics

• Source: BMC bioinformatics [BMC Bioinformatics] 2016 Nov 08; Vol. 17 (Suppl 12), pp. 345. Date of Electronic Publication: 2016 Nov 08.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Sample size calculation while controlling false discovery rate for differential expression analysis with RNA-sequencing experiments.

• Authors : Bi R; Department of Statistics, Iowa State University, Snedecor Hall, Ames, Iowa, 50011, USA.; Liu P

Subjects: Algorithms* ; Sequence Analysis, RNA*; RNA/RNA/RNA/*metabolism

• Source: BMC bioinformatics [BMC Bioinformatics] 2016 Mar 31; Vol. 17, pp. 146. Date of Electronic Publication: 2016 Mar 31.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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LFCseq: a nonparametric approach for differential expression analysis of RNA-seq data.

• Authors : Lin B; Zhang LF; Chen X

Subjects: Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/*methods ; RNA/RNA/RNA/*genetics ; Sequence Analysis, RNA/Sequence Analysis, RNA/Sequence Analysis, RNA/*methods

• Source: BMC genomics [BMC Genomics] 2014; Vol. 15 Suppl 10, pp. S7. Date of Electronic Publication: 2014 Dec 12.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Sample size calculation based on exact test for assessing differential expression analysis in RNA-seq data.

• Authors : Li CI; Su PF; Shyr Y

Subjects: Gene Expression Regulation*; RNA/RNA/RNA/*biosynthesis ; RNA/RNA/RNA/*genetics

• Source: BMC bioinformatics [BMC Bioinformatics] 2013 Dec 06; Vol. 14, pp. 357. Date of Electronic Publication: 2013 Dec 06.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Application of individualized differential expression analysis in human cancer proteome.

• Authors : Liu, Yachen^1,2 (AUTHOR); Lin, Yalan¹ (AUTHOR); Yang, Wenxian³ (AUTHOR)

• Source: Briefings in Bioinformatics. May2022, Vol. 23 Issue 3, p1-15. 15p.

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A comparative study of techniques for differential expression analysis on RNA-Seq data.

• Authors : Bauer, Denis; Edson, Janette; Narayanan, Ramesh

Subjects: Animals; Benchmarking; Cell Line

• Source: PLoS ONE. 9(8)

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Best practices on the differential expression analysis of multi-species RNA-seq

• Authors : Matthew Chung; Anup Mahurkar; David A. Rasko

Subjects: Best practices; Differential expression analysis; QH301-705.5

• Source: Genome Biology, Vol 22, Iss 1, Pp 1-23 (2021)Genome Biology

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