نتائج البحث

Landscape of semi-extractable RNAs across five human cell lines.

• Authors : Zeng C; Faculty of Science and Engineering, Waseda University, Tokyo 1698555, Japan.; Chujo T

Subjects: RNA*/RNA*/RNA*/isolation & purification ; RNA, Long Noncoding*/RNA, Long Noncoding*/RNA, Long Noncoding*/genetics ; RNA, Long Noncoding*/RNA, Long Noncoding*/RNA, Long Noncoding*/metabolism

• Source: Nucleic acids research [Nucleic Acids Res] 2023 Aug 25; Vol. 51 (15), pp. 7820-7831.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Direct imaging of intracellular RNA, DNA, and liquid-liquid phase separated membraneless organelles with Raman microspectroscopy.

• Authors : Samuel AZ; Research Organization for Nano and Life Innovations, Waseda University, 513, Wasedatsurumaki-cho, Shinjuku-ku, Tokyo, 162-0041, Japan. .; Sugiyama K

Subjects: RNA*/RNA*/RNA*/chemistry ; Biomolecular Condensates*; Cell Nucleus

• Source: Communications biology [Commun Biol] 2022 Dec 17; Vol. 5 (1), pp. 1383. Date of Electronic Publication: 2022 Dec 17.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Multi-resBind: a residual network-based multi-label classifier for in vivo RNA binding prediction and preference visualization.

• Authors : Zhao S; Waseda Research Institute for Science and Engineering, Waseda University, 3-4-1 Okubo Shinjuku-ku, Tokyo, 169-8555, Japan. .; Hamada M

Subjects: RNA*/RNA*/RNA*/genetics ; RNA*/RNA*/RNA*/metabolism ; RNA-Binding Proteins*/RNA-Binding Proteins*/RNA-Binding Proteins*/genetics

• Source: BMC bioinformatics [BMC Bioinformatics] 2021 Nov 15; Vol. 22 (1), pp. 554. Date of Electronic Publication: 2021 Nov 15.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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MoAIMS: efficient software for detection of enriched regions of MeRIP-Seq.

• Authors : Zhang Y; Department of Electrical Engineering and Bioscience, Faculty of Science and Engineering, Waseda University, 55N-06-10, 3-4-1 Okubo Shinjuku-ku, Tokyo, 169-8555, Japan.; AIST-Waseda University Computational Bio Big-Data Open Innovation Laboratory (CBBD-OIL), 3-4-1, Okubo Shinjuku-ku, Tokyo, 169-8555, Japan.

Subjects: Software*; Immunoprecipitation/Immunoprecipitation/Immunoprecipitation/*methods ; RNA/RNA/RNA/*metabolism

• Source: BMC bioinformatics [BMC Bioinformatics] 2020 Mar 14; Vol. 21 (1), pp. 103. Date of Electronic Publication: 2020 Mar 14.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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MazF activation causes ACA sequence-independent and selective alterations in RNA levels in Escherichia coli.

• Authors : Akiyama K; iGEM Team Tokyo_Tech 2016, Tokyo Institute of Technology, 2-12-1 Ookayama, Meguro-ku, Tokyo, 152-8550, Japan.; Fujisawa K

Subjects: DNA-Binding Proteins/DNA-Binding Proteins/DNA-Binding Proteins/*metabolism ; Endoribonucleases/Endoribonucleases/Endoribonucleases/*metabolism ; Escherichia coli/Escherichia coli/Escherichia coli/*genetics

• Source: Archives of microbiology [Arch Microbiol] 2020 Jan; Vol. 202 (1), pp. 105-114. Date of Electronic Publication: 2019 Sep 04.Publisher: Springer-Verlag Country of Publication: Germany NLM ID: 0410427 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Hsa_circ_0067997 promotes the progression of gastric cancer by inhibition of miR-515-5p and activation of X chromosome-linked inhibitor of apoptosis (XIAP).

• Authors : Zhang H; a Department of Gastroenterology , The People's Hospital of Anyang city , Anyang , China.; b Graduate School, Xinxiang Medical University , Xinxiang , China.

Subjects: Disease Progression*; MicroRNAs/MicroRNAs/MicroRNAs/*genetics ; RNA/RNA/RNA/*genetics

• Source: Artificial cells, nanomedicine, and biotechnology [Artif Cells Nanomed Biotechnol] 2019 Dec; Vol. 47 (1), pp. 308-318.Publisher: Taylor & Francis Country of Publication: England NLM ID: 101594777 Publication Model: Print Cited Medium: Internet ISSN: 2169-141X

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reactIDR: evaluation of the statistical reproducibility of high-throughput structural analyses towards a robust RNA structure prediction.

• Authors : Kawaguchi R; Artificial Intelligence Research Center, National Institute of Advanced Industrial Science and Technology, Aomi, Koto-ku, Tokyo, Japan. .; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, the University of Tokyo, Kashiwanoha, Kashiwa-shi, Chiba, Japan. .

Subjects: Algorithms* ; Nucleic Acid Conformation* ; Statistics as Topic*

• Source: BMC bioinformatics [BMC Bioinformatics] 2019 Mar 29; Vol. 20 (Suppl 3), pp. 130. Date of Electronic Publication: 2019 Mar 29.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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DeepM6ASeq: prediction and characterization of m6A-containing sequences using deep learning.

• Authors : Zhang Y; Department of Electrical Engineering and Bioscience, Faculty of Science and Engineering, Waseda University, 55N-06-10, 3-4-1 Okubo Shinjuku-ku, Tokyo, 169-8555, Japan.; AIST-Waseda University Computational Bio Big-Data Open Innovation Laboratory (CBBD-OIL), 3-4-1, Okubo Shinjuku-ku, Tokyo, 169-8555, Japan.

Subjects: Alternative Splicing* ; Deep Learning*; Adenosine/Adenosine/Adenosine/*analogs & derivatives

• Source: BMC bioinformatics [BMC Bioinformatics] 2018 Dec 31; Vol. 19 (Suppl 19), pp. 524. Date of Electronic Publication: 2018 Dec 31.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Recent trends in RNA informatics: a review of machine learning and deep learning for RNA secondary structure prediction and RNA drug discovery.

• Authors : Sato, Kengo¹ (AUTHOR) ; Hamada, Michiaki^2,3,4 (AUTHOR)

• Source: Briefings in Bioinformatics. Jul2023, Vol. 24 Issue 4, p1-13. 13p.

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Chemical and structural characterization of a model Post-Termination Complex (PoTC) for the ribosome recycling reaction: Evidence for the release of the mRNA by RRF and EF-G.

• Authors : Iwakura, Nobuhiro^1,2; Yokoyama, Takeshi³; Quaglia, Fabio^1,2,4

Subjects: *RIBOSOME recycling factor; *MESSENGER RNA; *TRANSFER RNA

• Source: PLoS ONE. 5/24/2017, Vol. 12 Issue 5, p1-25. 25p.

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