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Radiogenomic analysis for predicting lymph node metastasis and molecular annotation of radiomic features in pancreatic cancer

• Authors : Yi Tang; Yi-xi Su; Jin-mei Zheng

Subjects: Male; 0301 basic medicine; Radiomics

• Source: J Transl MedJournal of Translational Medicine, Vol 22, Iss 1, Pp 1-10 (2024)

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HiTE: a fast and accurate dynamic boundary adjustment approach for full-length transposable element detection and annotation

• Authors : Kang Hu; Peng Ni; Minghua Xu

Subjects: 0303 health sciences; Genome; Science

• Source: Nat CommunNature Communications, Vol 15, Iss 1, Pp 1-14 (2024)

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CellWalker integrates single-cell and bulk data to resolve regulatory elements across cell types in complex tissues

• Authors : Przytycki, Pawel F; Pollard, Katherine S

Subjects: Biochemistry and Cell Biology; Bioinformatics and Computational Biology; Genetics

• Source: Genome Biology. 22(1)

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PHA4GE quality control contextual data tags: standardized annotations for sharing public health sequence datasets with known quality issues to facilitate testing and training

• Authors : Emma J. Griffiths; Inês Mendes; Finlay Maguire

Subjects: Genomic Methodologies; Quality Control; 0303 health sciences

• Source: Microb Genom

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Enhanced genome assembly and a new official gene set for Tribolium castaneum

• Authors : Herndon, Nicolae; Shelton, Jennifer; Gerischer, Lizzy

Subjects: Genetics; Human Genome; Biotechnology

• Source: BMC Genomics. 21(1)

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An atlas of dynamic chromatin landscapes in mouse fetal development

• Authors : Gorkin, David U; Barozzi, Iros; Zhao, Yuan

Subjects: Biological Sciences; Bioinformatics and Computational Biology; Biomedical and Clinical Sciences

• Source: Nature. 583(7818)

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ToxCodAn-Genome: an automated pipeline for toxin-gene annotation in genome assembly of venomous lineages

• Authors : Pedro G Nachtigall; Alan M Durham; Darin R Rokyta

Subjects: 0301 basic medicine; 03 medical and health sciences; Genome

• Source: Gigascience

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Enzyme function prediction using contrastive learning

• Authors : Tianhao Yu; Haiyang Cui; Jianan Canal Li

Subjects: Machine Learning; Sequence Analysis, Protein; Biocatalysis

• Source: Science. 379:1358-1363

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Systematic discovery of conservation states for single-nucleotide annotation of the human genome.

• Authors : Arneson, Adriana; Ernst, Jason

Subjects: Comparative genomics; Evolutionary genetics; Genome informatics

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Six reference-quality genomes reveal evolution of bat adaptations

• Authors : Sylke Winkler; Emma C. Teeling; Gareth Jones ...

Subjects: Reproducibility of results; RNA, Untranslated; RNA, untranslated/genetics

• Source: NatureJebb, D, Jones, G, Teeling, E C & al., E 2020, ' Six reference-quality genomes reveal evolution of bat adaptations ', Nature, vol. 583, pp. 578-584 .

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