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Quantitative Characterization of the Impact of Protein-Protein Interactions on Ligand-Protein Binding: A Multi-Chain Dynamics Perturbation Analysis Method.

• Authors : Li L; College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, 30 South Puzhu Road, Jiangbei New District, Nanjing 211816, China.; Li H

Subjects: Protein Binding* ; Proteins*/Proteins*/Proteins*/metabolism ; Proteins*/Proteins*/Proteins*/chemistry

• Source: International journal of molecular sciences [Int J Mol Sci] 2024 Aug 23; Vol. 25 (17). Date of Electronic Publication: 2024 Aug 23.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Probing Ligand Protein Binding Equilibria with Fluorescence Fluctuation Spectroscopy

• Authors : Chen, Yan; Müller, Joachim D; Tetin, Sergey Y

Subjects: Biochemistry and Cell Biology; Biological Sciences; Antibodies

• Source: Biophysical Journal. 79(2)

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A quantum mechanical approach to ligand binding — Calculation of ligand–protein binding affinities for stromelysin-1 (MMP-3) inhibitors.

• Authors : Li, Jian¹ ; Reynolds, Charles. H.¹

• Source: Canadian Journal of Chemistry. Oct2009, Vol. 87 Issue 10, p1480-1484. 4p. 3 Diagrams, 2 Charts, 1 Graph.

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Computational modelling studies on in silico missenses in COVID-19 proteins and their effects on ligand–protein interactions.

• Authors : Sule, Laxmi¹ (AUTHOR); Gupta, Swagata² (AUTHOR); Jain, Nilanjana³ (AUTHOR)

• Source: Journal of Mathematical Chemistry. Nov2024, Vol. 62 Issue 10, p2540-2561. 22p.

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Green Biosynthesis, Antioxidant, Antibacterial, and Anticancer Activities of Silver Nanoparticles of Luffa acutangula Leaf Extract.

• Authors : Nallappan, Devi^1,2 (AUTHOR); Fauzi, Agustine Nengsih³ (AUTHOR); Krishna, Balam Satheesh⁴ (AUTHOR)

• Source: BioMed Research International. 9/29/2021, p1-28. 28p.

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Red-Edge Excitation Shift Spectroscopy (REES): Application to Hidden Bound States of Ligands in Protein-Ligand Complexes.

• Authors : Kabir ML; Optical Sciences Center, Department of Physics and Astronomy, School of Science, Swinburne University of Technology, Melbourne, VIC 3122, Australia.; Wang F

Subjects: Proteins/Proteins/Proteins/*chemistry ; Spectrometry, Fluorescence/Spectrometry, Fluorescence/Spectrometry, Fluorescence/*methods; Fluorescence Polarization/Fluorescence Polarization/Fluorescence Polarization/methods

• Source: International journal of molecular sciences [Int J Mol Sci] 2021 Mar 04; Vol. 22 (5). Date of Electronic Publication: 2021 Mar 04.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101092791 Publication Model: Electronic Cited Medium: Internet ISSN: 1422-0067

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Photochemical Reactions in the Synthesis of Protein-Drug Conjugates.

• Authors : Holland JP; Department of Chemistry, University of Zurich, Winterthurerstrasse 190, 8057, Zurich, Switzerland.; Gut M

Subjects: Pharmaceutical Preparations/Pharmaceutical Preparations/Pharmaceutical Preparations/*chemistry ; Proteins/Proteins/Proteins/*chemistry; Animals

• Source: Chemistry (Weinheim an der Bergstrasse, Germany) [Chemistry] 2020 Jan 02; Vol. 26 (1), pp. 33-48. Date of Electronic Publication: 2019 Nov 19.Publisher: Wiley-VCH Country of Publication: Germany NLM ID: 9513783 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1521-3765

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Transient States and Barriers from Molecular Simulations and the Milestoning Theory: Kinetics in Ligand-Protein Recognition and Compound Design.

• Authors : Tang, Zhiye; Chang, Chia-En; Chen, Si-Han

Subjects: Humans; Kinetics; Ligands

• Source: Journal of Chemical Theory and Computation. 16(3)

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Protein structure and computational drug discovery.

• Authors : Nero TL; Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Parkville, Victoria 3010, Australia.; Parker MW

Subjects: Drug Design*; Computational Biology/Computational Biology/Computational Biology/*methods ; Drug Discovery/Drug Discovery/Drug Discovery/*methods

• Source: Biochemical Society transactions [Biochem Soc Trans] 2018 Oct 19; Vol. 46 (5), pp. 1367-1379. Date of Electronic Publication: 2018 Sep 20.Publisher: Portland Press On The Behalf Of The Biochemical Society Country of Publication: England NLM ID: 7506897 Publication Model: Print-Electronic Cited

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sc-PDB: a 3D-database of ligandable binding sites--10 years on.

• Authors : Desaphy J; Laboratoire d'innovation thérapeutique, Medalis Drug Discovery Center, UMR7200 CNRS-Université de Strasbourg, F-67400 Illkirch, France.; Bret G

Subjects: Databases, Protein* ; Drug Design*; Proteins/Proteins/Proteins/*chemistry

• Source: Nucleic acids research [Nucleic Acids Res] 2015 Jan; Vol. 43 (Database issue), pp. D399-404. Date of Electronic Publication: 2014 Oct 09.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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