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  • 1-10 ل  8,276 نتائج ل ""Models, Molecular""

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Subject : nucleic acid conformation
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Academic Journal

Structural basis for a highly conserved RNA-mediated enteroviral genome replication.

  • Authors : Das NK; Department of Chemistry and Biochemistry, University of Maryland, Baltimore County, Baltimore, MD 21250, USA.; Vogt J

Subjects: RNA, Viral*/RNA, Viral*/RNA, Viral*/chemistry ; RNA, Viral*/RNA, Viral*/RNA, Viral*/genetics ; RNA, Viral*/RNA, Viral*/RNA, Viral*/metabolism

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Oct 14; Vol. 52 (18), pp. 11218-11233.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

RNAtango: Analysing and comparing RNA 3D structures via torsional angles.

  • Authors : Mackowiak M; Institute of Computing Science, Poznan University of Technology, Poznan, Poland.; Adamczyk B

Subjects: Nucleic Acid Conformation* ; RNA*/RNA*/RNA*/chemistry ; Software*

  • Source: PLoS computational biology [PLoS Comput Biol] 2024 Oct 07; Vol. 20 (10), pp. e1012500. Date of Electronic Publication: 2024 Oct 07 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Sampling globally and locally correct RNA 3D structures using Ernwin, SPQR and experimental SAXS data.

  • Authors : Thiel BC; Department of Theoretical Chemistry, University of Vienna, Währinger Strasse 17, Vienna 1090, Austria.; Bussi G

Subjects: Scattering, Small Angle* ; X-Ray Diffraction*/X-Ray Diffraction*/X-Ray Diffraction*/methods ; Nucleic Acid Conformation*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Sep 09; Vol. 52 (16), pp. e73.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

SimRNAweb v2.0: a web server for RNA folding simulations and 3D structure modeling, with optional restraints and enhanced analysis of folding trajectories.

  • Authors : Moafinejad SN; Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw, ul. Ks. Trojdena 4, PL-02-109 Warsaw, Poland.; de Aquino BRH

Subjects: RNA Folding* ; Software* ; RNA*/RNA*/RNA*/chemistry

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 05; Vol. 52 (W1), pp. W368-W373.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Knotted artifacts in predicted 3D RNA structures.

  • Authors : Gren BA; Centre of New Technologies, University of Warsaw, Warsaw, Poland.; Antczak M

Subjects: Nucleic Acid Conformation* ; RNA*/RNA*/RNA*/chemistry ; Computational Biology*/Computational Biology*/Computational Biology*/methods

  • Source: PLoS computational biology [PLoS Comput Biol] 2024 Jun 20; Vol. 20 (6), pp. e1011959. Date of Electronic Publication: 2024 Jun 20 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Mirror-Image RNA: A Right-Handed Z-Form RNA and Its Ligand Complex.

  • Authors : Song Y; Division of Chemistry, Department of Medical Sciences, Faculty of Medicine, University of Miyazaki, 5200 Kihara, Kiyotake, Miyazaki 889-1692, Japan.; Wang S

Subjects: RNA*/RNA*/RNA*/chemistry ; Nucleic Acid Conformation*; Ligands

  • Source: Molecules (Basel, Switzerland) [Molecules] 2024 Oct 16; Vol. 29 (20). Date of Electronic Publication: 2024 Oct 16.Publisher: MDPI Country of Publication: Switzerland NLM ID: 100964009 Publication Model: Electronic Cited Medium: Internet ISSN: 1420-3049

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Academic Journal

Assembly of the bacterial ribosome with circularly permuted rRNA.

  • Authors : Dong X; Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.; Department of Chemistry, and The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037, USA.

Subjects: RNA, Ribosomal*/RNA, Ribosomal*/RNA, Ribosomal*/metabolism ; RNA, Ribosomal*/RNA, Ribosomal*/RNA, Ribosomal*/chemistry ; RNA, Ribosomal*/RNA, Ribosomal*/RNA, Ribosomal*/genetics

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Oct 14; Vol. 52 (18), pp. 11254-11265.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

ARTEMIS: a method for topology-independent superposition of RNA 3D structures and structure-based sequence alignment.

  • Authors : Bohdan DR; International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland.; Bujnicki JM

Subjects: Nucleic Acid Conformation* ; Sequence Alignment*/Sequence Alignment*/Sequence Alignment*/methods ; Software*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Oct 14; Vol. 52 (18), pp. 10850-10861.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

High-throughput determination of RNA tertiary contact thermodynamics by quantitative DMS chemical mapping.

  • Authors : Lange B; Department of Chemistry, University of Nebraska, 639 North 12th St, Lincoln, NE 68588, USA.; Gil RG

Subjects: Thermodynamics* ; RNA*/RNA*/RNA*/chemistry ; Nucleic Acid Conformation*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Sep 09; Vol. 52 (16), pp. 9953-9965.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Structural basis of water-mediated cis Watson-Crick/Hoogsteen base-pair formation in non-CpG methylation.

  • Authors : Lin SM; Graduate Institute of Genomics and Bioinformatics, National Chung Hsing University, Taichung 402, Taiwan.; Huang HT

Subjects: Base Pairing* ; DNA*/DNA*/DNA*/chemistry ; DNA Methylation*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Aug 12; Vol. 52 (14), pp. 8566-8579.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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  • 1-10 ل  8,276 نتائج ل ""Models, Molecular""