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Daring to be differential: metabarcoding analysis of soil and plant-related microbial communities using amplicon sequence variants and operational taxonomical units.

• Authors : Joos L; Flanders Research Institute for Agriculture, Fisheries and Food (ILVO), Plant Sciences Unit, Burgemeester Van Gansberghelaan 92, 9820, Merelbeke, Belgium.; Department of Applied Mathematics, Computer Science and Statistics, Ghent University, Krijgslaan 281, 9000, Ghent, Belgium.

Subjects: Microbiota*/Microbiota*/Microbiota*/genetics ; Soil*; Bacteria/Bacteria/Bacteria/genetics

• Source: BMC genomics [BMC Genomics] 2020 Oct 22; Vol. 21 (1), pp. 733. Date of Electronic Publication: 2020 Oct 22.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Daring to be differential: metabarcoding analysis of soil and plant-related microbial communities using amplicon sequence variants and operational taxonomical units

• Authors : Bart Vandecasteele; Lisa Joos; Annelies Haegeman

Subjects: OTU; lcsh:QH426-470; lcsh:Biotechnology

• Source: BMC Genomics, Vol 21, Iss 1, Pp 1-17 (2020)BMC GenomicsBMC GENOMICS

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A mixed-model approach for estimating drivers of microbiota community composition and differential taxonomic abundance

• Authors : Amy R. Sweeny; Hannah Lemon; Anan Ibrahim

Subjects: microbiota; metabarcoding; 16S

• Source: mSystems, Vol 8, Iss 4 (2023)

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Method for estimating disease risk from microbiome data using structural equation modeling

• Authors : Hidetaka Tokuno; Tatsuya Itoga; Jumpei Kasuga

Subjects: microbiota; human intestinal microbiome; atopic dermatitis

• Source: Frontiers in Microbiology, Vol 14 (2023)

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Microbiota characterization of sheep milk and its association with somatic cell count using 16s rRNA gene sequencing.

• Authors : Esteban-Blanco C; Facultad de Veterinaria, Departamento de Producción Animal, Universidad de León, León, Spain.; Gutiérrez-Gil B

Subjects: Sequence Analysis, RNA*; Microbiota/Microbiota/Microbiota/*genetics ; Milk/Milk/Milk/*microbiology

• Source: Journal of animal breeding and genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie [J Anim Breed Genet] 2020 Jan; Vol. 137 (1), pp. 73-83. Date of Electronic Publication: Publisher: Blackwell Country of Publication: Germany NLM ID: 100955807 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1439-0388

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ASV vs OTUs clustering: Effects on alpha, beta, and gamma diversities in microbiome metabarcoding studies.

• Authors : Fasolo A; Department of Agronomy, Animals, Food, Natural Resources and Environment DAFNAE, University of Padova, Padua, Italy.; Deb S

Subjects: Microbiota*/Microbiota*/Microbiota*/genetics ; RNA, Ribosomal, 16S*/RNA, Ribosomal, 16S*/RNA, Ribosomal, 16S*/genetics; Cluster Analysis

• Source: PloS one [PLoS One] 2024 Oct 03; Vol. 19 (10), pp. e0309065. Date of Electronic Publication: 2024 Oct 03 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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Preventing illegal seafood trade using machine-learning assisted microbiome analysis.

• Authors : Peruzza L; Department of Comparative Biomedicine and Food Science, University of Padova, Viale Dell'Università 16, Legnaro, 35020, Italy.; Cicala F

Subjects: Seafood*/Seafood*/Seafood*/microbiology ; Machine Learning* ; Bivalvia*/Bivalvia*/Bivalvia*/microbiology

• Source: BMC biology [BMC Biol] 2024 Sep 11; Vol. 22 (1), pp. 202. Date of Electronic Publication: 2024 Sep 11.Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007

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Insight Into the Microbial Co-occurrence and Diversity of 73 Grapevine (Vitis vinifera) Crown Galls Collected Across the Northern Hemisphere

• Authors : Han Ming Gan; Ernõ Szegedi; Rabeb Fersi

Subjects: Agrobacterium; Allorhizobium vitis; amplicon sequence variants

• Source: Frontiers in Microbiology, Vol 10 (2019)

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Analiza rezultata sekvenciranja i povezanost konzistencije i učestalosti stolice sa sastavom crijevne mikrobiote ; Analysis of sequencing results and association between stool consistency and frequency and gut microbiota composition

• Authors : Eranović, Ivana; Žučko, Jurica

Subjects: mikrobiota; stolica; QIIME2

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Data_Sheet_1_Method for estimating disease risk from microbiome data using structural equation modeling.docx

• Authors : Hidetaka Tokuno; Tatsuya Itoga; Jumpei Kasuga

Subjects: Microbiology; Microbial Genetics; Microbial Ecology

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