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Academic Journal

Identification and validation of new MADS-box homologous genes in 3010 rice pan-genome.

  • Authors : Li W; Joint International Research Laboratory of Metabolic and Developmental Sciences, State Key Laboratory of Hybrid Rice, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China.; Department of Bioinformatics and Biostatistics, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China.

Subjects: Genome, Plant*/Genome, Plant*/Genome, Plant*/genetics ; Oryza*/Oryza*/Oryza*/genetics ; Oryza*/Oryza*/Oryza*/metabolism

  • Source: Plant cell reports [Plant Cell Rep] 2023 Jun; Vol. 42 (6), pp. 975-988. Date of Electronic Publication: 2023 Apr 05.Publisher: Springer Country of Publication: Germany NLM ID: 9880970 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-203X

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Academic Journal

Chromosomal-level genome assembly of the high-quality Xian/Indica rice (Oryza sativa L.) Xiangyaxiangzhan.

  • Authors : Liang J; Rice Research Institute Guangdong Academy of Agricultural Sciences, Guangdong Key Laboratory of New Technology in Rice Breeding, Guangdong Rice Engineering Laboratory, Guangzhou, 510640, China.; Kong L

Subjects: Genome, Plant* ; Oryza*/Oryza*/Oryza*/genetics; Plant Breeding

  • Source: BMC plant biology [BMC Plant Biol] 2023 Feb 14; Vol. 23 (1), pp. 94. Date of Electronic Publication: 2023 Feb 14.Publisher: BioMed Central Country of Publication: England NLM ID: 100967807 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2229

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Academic Journal

Pinpointing genomic regions associated with root system architecture in rice through an integrative meta-analysis approach.

  • Authors : Daryani P; Department of Agronomy & Plant Breeding, University of Mohaghegh Ardabili, Ardabil, Iran.; Department of Systems Biology, Agricultural Biotechnology Research Institute of Iran (ABRII), Agricultural Research Education and Extension Organization (AREEO), 31535-1897, Karaj, Iran.

Subjects: Genome, Plant*; Oryza/Oryza/Oryza/*genetics ; Plant Roots/Plant Roots/Plant Roots/*genetics

  • Source: TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik [Theor Appl Genet] 2022 Jan; Vol. 135 (1), pp. 81-106. Date of Electronic Publication: 2021 Oct 08.Publisher: Springer Country of Publication: Germany NLM ID: 0145600 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-2242

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Academic Journal

Genomic Basis of Transcriptome Dynamics in Rice under Field Conditions.

  • Authors : Kashima M; Research Institute for Food and Agriculture, Ryukoku University, Yokotani 1-5, Seta Oe-cho, Otsu, Shiga 520-2194, Japan.; Sakamoto RL

Subjects: Genome, Plant* ; Transcriptome*; Oryza/Oryza/Oryza/*genetics

  • Source: Plant & cell physiology [Plant Cell Physiol] 2021 Nov 17; Vol. 62 (9), pp. 1436-1445.Publisher: Oxford University Press Country of Publication: Japan NLM ID: 9430925 Publication Model: Print Cited Medium: Internet ISSN: 1471-9053

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Academic Journal

Development and validation of diagnostic SNP markers for quality control genotyping in a collection of four rice (Oryza) species.

  • Authors : Gouda AC; Africa Rice Center (AfricaRice), M'bé Research Station, 01 B.P. 2551, Bouaké 01, Côte d'Ivoire.; Warburton ML

Subjects: Genome, Plant* ; Genotype* ; Polymorphism, Single Nucleotide*

  • Source: Scientific reports [Sci Rep] 2021 Sep 20; Vol. 11 (1), pp. 18617. Date of Electronic Publication: 2021 Sep 20.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Genomic divergence during feralization reveals both conserved and distinct mechanisms of parallel weediness evolution.

  • Authors : Imaizumi T; Institute for Plant Protection, National Agriculture and Food Research Organization, Tsukuba, Japan. .; Ebana K

Subjects: Biological Evolution* ; Domestication* ; Evolution, Molecular*

  • Source: Communications biology [Commun Biol] 2021 Aug 10; Vol. 4 (1), pp. 952. Date of Electronic Publication: 2021 Aug 10.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

A convolution based computational approach towards DNA N6-methyladenine site identification and motif extraction in rice genome.

  • Authors : Rahman CR; United International University, Dhaka, Bangladesh.; Amin R

Subjects: Genome, Plant* ; Neural Networks, Computer*; Epigenomics/Epigenomics/Epigenomics/*methods

  • Source: Scientific reports [Sci Rep] 2021 May 14; Vol. 11 (1), pp. 10357. Date of Electronic Publication: 2021 May 14.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Development of a genome-wide InDel marker set for allele discrimination between rice (Oryza sativa) and the other seven AA-genome Oryza species.

  • Authors : Hechanova SL; Gene Identification and Validation Group, Genetic Design and Validation Unit, International Rice Research Institute (IRRI), 4031, Los Baños, Laguna, Philippines.; Bhattarai K

Subjects: Alleles* ; Genome, Plant* ; INDEL Mutation*

  • Source: Scientific reports [Sci Rep] 2021 Apr 26; Vol. 11 (1), pp. 8962. Date of Electronic Publication: 2021 Apr 26.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Genome-Wide Analysis of the RAV Transcription Factor Genes in Rice Reveals Their Response Patterns to Hormones and Virus Infection.

  • Authors : Chen C; State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Key Laboratory of Biotechnology in Plant Protection of Ministry of Agriculture and Zhejiang Province, Institute of Plant Virology, Ningbo University, Ningbo 315211, China.; Li Y

Subjects: Gene Expression Regulation, Plant* ; Genome, Plant* ; Phylogeny*Southern rice black-streaked dwarf virus

  • Source: Viruses [Viruses] 2021 Apr 25; Vol. 13 (5). Date of Electronic Publication: 2021 Apr 25.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101509722 Publication Model: Electronic Cited Medium: Internet ISSN: 1999-4915

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Academic Journal

Highly efficient generation of bacterial leaf blight-resistant and transgene-free rice using a genome editing and multiplexed selection system.

  • Authors : Yu K; Syngenta Biotechnology (China) Co., Ltd, No.25, Life Science Park Road, Beijing, 102206, China.; Liu Z

Subjects: Disease Resistance* ; Genome, Plant*; Gene Editing/Gene Editing/Gene Editing/*methods Xanthomonas oryzae

  • Source: BMC plant biology [BMC Plant Biol] 2021 Apr 24; Vol. 21 (1), pp. 197. Date of Electronic Publication: 2021 Apr 24.Publisher: BioMed Central Country of Publication: England NLM ID: 100967807 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2229

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