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  • 1-10 ل  426 نتائج ل ""Deconvolution""

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Subject : dna methylation
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Academic Journal

A novel method for cell deconvolution using DNA methylation in PCA space.

  • Authors : Xu H; Division of Human Genetics, Cincinnati Children's Hospital Medical Center, Cincinnati, OH, USA.; Zhang G

Subjects: DNA Methylation* ; Principal Component Analysis* ; Glioma*/Glioma*/Glioma*/genetics

  • Source: BMC genomics [BMC Genomics] 2024 Aug 23; Vol. 25 (1), pp. 798. Date of Electronic Publication: 2024 Aug 23.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Academic Journal

Computational deconvolution of DNA methylation data from mixed DNA samples.

  • Authors : Ferro Dos Santos MR; VIB-UGent Center for Medical Biotechnology (CMB), Technologiepark-Zwijnaarde 75, 9052 Zwijnaarde, Belgium.; Cancer Research Institute Ghent (CRIG), 9000 Ghent, Belgium.

Subjects: DNA Methylation* ; Computational Biology*/Computational Biology*/Computational Biology*/methods; Humans

  • Source: Briefings in bioinformatics [Brief Bioinform] 2024 Mar 27; Vol. 25 (3).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Tumor microenvironment deconvolution identifies cell-type-independent aberrant DNA methylation and gene expression in prostate cancer.

  • Authors : Reynolds SR; Department of Epidemiology, Geisel School of Medicine at Dartmouth, Lebanon, NH, USA. .; Zhang Z

Subjects: DNA Methylation* ; Prostatic Neoplasms*/Prostatic Neoplasms*/Prostatic Neoplasms*/pathology; Male

  • Source: Clinical epigenetics [Clin Epigenetics] 2024 Jan 03; Vol. 16 (1), pp. 5. Date of Electronic Publication: 2024 Jan 03.Publisher: BiomedCentral Country of Publication: Germany NLM ID: 101516977 Publication Model: Electronic Cited Medium: Internet ISSN: 1868-7083

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Academic Journal

scMD facilitates cell type deconvolution using single-cell DNA methylation references.

  • Authors : Cai M; Department of Biostatistics, University of Pittsburgh, Pittsburgh, PA, USA.; Zhou J

Subjects: DNA Methylation* ; Brain*/Brain*/Brain*/metabolism; Gene Expression Profiling

  • Source: Communications biology [Commun Biol] 2024 Jan 02; Vol. 7 (1), pp. 1. Date of Electronic Publication: 2024 Jan 02.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Down Syndrome Altered Cell Composition in Blood, Brain, and Buccal Swab Samples Profiled by DNA-Methylation-Based Cell-Type Deconvolution.

  • Authors : Zhang Z; Department of Epidemiology, Geisel School of Medicine at Dartmouth, Lebanon, NH 03756, USA.; Stolrow HG

Subjects: DNA Methylation*/DNA Methylation*/DNA Methylation*/genetics ; Down Syndrome*/Down Syndrome*/Down Syndrome*/genetics ; Down Syndrome*/Down Syndrome*/Down Syndrome*/metabolism

  • Source: Cells [Cells] 2023 Apr 15; Vol. 12 (8). Date of Electronic Publication: 2023 Apr 15.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101600052 Publication Model: Electronic Cited Medium: Internet ISSN: 2073-4409

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Academic Journal

A novel method for cell deconvolution using DNA methylation in PCA space

Subjects: DNA methylation; Cell deconvolution; Bioinformatics

  • Source: BMC Genomics, Vol 25, Iss 1, Pp 1-6 (2024)

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Academic Journal

CelFiE-ISH: a probabilistic model for multi-cell type deconvolution from single-molecule DNA methylation haplotypes

Subjects: Bioinformatics; Next-generation sequencing; DNA methylation

  • Source: Genome Biology, Vol 25, Iss 1, Pp 1-27 (2024)

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Academic Journal

Comprehensive tissue deconvolution of cell-free DNA by deep learning for disease diagnosis and monitoring

Subjects: Human Genome; Bioengineering; Genetics

  • Source: Proceedings of the National Academy of Sciences of the United States of America. 120(28)

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Academic Journal

HiTIMED: hierarchical tumor immune microenvironment epigenetic deconvolution for accurate cell type resolution in the tumor microenvironment using tumor-type-specific DNA methylation data.

  • Authors : Zhang Z; Department of Epidemiology, Geisel School of Medicine, Dartmouth College, Lebanon, NH, USA. .; Wiencke JK

Subjects: DNA Methylation*/DNA Methylation*/DNA Methylation*/genetics ; Neoplasms*/Neoplasms*/Neoplasms*/genetics; Humans

  • Source: Journal of translational medicine [J Transl Med] 2022 Nov 08; Vol. 20 (1), pp. 516. Date of Electronic Publication: 2022 Nov 08.Publisher: BioMed Central Country of Publication: England NLM ID: 101190741 Publication Model: Electronic Cited Medium: Internet ISSN: 1479-5876

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Academic Journal

Quantification of tumour-infiltrating immune cells through deconvolution of DNA methylation data in Ewing sarcomas

Subjects: Ewing sarcoma; DNA methylation; immune microenvironment

  • Source: Frontiers in Epigenetics and Epigenomics, Vol 2 (2024)

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  • 1-10 ل  426 نتائج ل ""Deconvolution""