نتائج البحث

A De Novo Shape Motif Discovery Algorithm Reveals Preferences of Transcription Factors for DNA Shape Beyond Sequence Motifs.

• Authors : Samee, Md Abul Hassan; Bruneau, Benoit G; Pollard, Katherine S

Subjects: Humans; Transcription Factors; DNA

• Source: Cell systems. 8(1)

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A Clustering Approach for Motif Discovery in ChIP-Seq Dataset

• Authors : Chun-xiao Sun; Yu Yang; Hua Wang

Subjects: motif discovery; transcription factor binding sites; planted motif search

• Source: Entropy, Vol 21, Iss 8, p 802 (2019)

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DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data

• Authors : Chadi Saad; Laurent Noé; Hugues Richard

Subjects: Motif; DNA; Chip-Seq

• Source: BMC Bioinformatics, Vol 19, Iss 1, Pp 1-10 (2018)

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DiNAMO: highly sensitive DNA motif discovery in high-throughput sequencing data.

• Authors : Saad, Chadi^1,2 ; Noé, Laurent¹ ; Richard, Hugues³

• Source: BMC Bioinformatics. 6/11/2018, Vol. 19 Issue 1, p1-10. 10p. 2 Diagrams, 3 Charts, 2 Graphs.

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SeAMotE: a method for high-throughput motif discovery in nucleic acid sequences.

• Authors : Agostini, Federico^1,2 (AUTHOR); Cirillo, Davide^1,2 (AUTHOR); Ponti, Riccardo Delli^1,2 (AUTHOR)

• Source: BMC Genomics. 2014, Vol. 15 Issue 1, p925-932. 8p. 1 Color Photograph, 1 Diagram, 2 Charts, 2 Graphs.

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Motif discovery and transcription factor binding sites before and after the next-generation sequencing era.

• Authors : Zambelli, Federico; Pesole, Graziano; Pavesi, Giulio

• Source: Briefings in Bioinformatics. Mar2013, Vol. 14 Issue 2, p225-237. 13p. 1 Diagram, 1 Graph.

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A review of ensemble methods for de novo motif discovery in ChIP-Seq data.

• Authors : Lihu, Andrei¹ ; Holban, Ştefan²

• Source: Briefings in Bioinformatics. Nov2015, Vol. 16 Issue 6, p964-973. 10p.

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biomapp::chip: large-scale motif analysis

• Authors : Jader M. Caldonazzo Garbelini; Danilo S. Sanches; Aurora T. Ramirez Pozo

Subjects: Motif discovery; Chip-seq; Kmer counting

• Source: BMC Bioinformatics, Vol 25, Iss 1, Pp 1-26 (2024)

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SeAMotE: a method for high-throughput motif discovery in nucleic acid sequences

• Authors : Gian Gaetano Tartaglia; Davide Cirillo; Federico Agostini

Subjects: ChIP-seq; CLIP-seq; discriminative motif discovery

• Source: BMC GenomicsRecercat. Dipósit de la Recerca de Catalunyainstname

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Transcription factor-binding k-mer analysis clarifies the cell type dependency of binding specificities and cis-regulatory SNPs in humans.

• Authors : Tahara, Saeko^1,2 (AUTHOR); Tsuchiya, Takaho^1,3 (AUTHOR); Matsumoto, Hirotaka^4,5 (AUTHOR)

• Source: BMC Genomics. 10/7/2023, Vol. 24 Issue 1, p1-21. 21p.

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