نتائج البحث

Bioinformatic Methodologies in Assessing Gut Microbiota.

• Authors : Fox, James Douglas¹ (AUTHOR) ; Sims, Austin¹ (AUTHOR) ; Ross, Morgan¹ (AUTHOR)

• Source: Microbiology Research. Dec2024, Vol. 15 Issue 4, p2554-2574. 21p.

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Application of metagenomic shotgun sequencing to detect vector-borne pathogens in clinical blood samples.

• Authors : Vijayvargiya, Prakhar¹; Jeraldo, Patricio R.^2,3; Thoendel, Matthew J.¹

Subjects: *SHOTGUN sequencing; *PLASMODIUM falciparum; *BABESIA

• Source: PLoS ONE. 10/1/2019, Vol. 14 Issue 10, p1-12. 12p.

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McClintock: An Integrated Pipeline for Detecting Transposable Element Insertions in Whole-Genome Shotgun Sequencing Data.

• Authors : Nelson, Michael G.¹; Linheiro, Raquel S.^1,2 ; Bergman, Casey M.¹

• Source: G3: Genes | Genomes | Genetics. Aug2017, Vol. 7 Issue 8, p2763-2778. 16p.

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SprayNPray: user-friendly taxonomic profiling of genome and metagenome contigs.

• Authors : Garber, Arkadiy I.¹ (AUTHOR) ; Armbruster, Catherine R.² (AUTHOR); Lee, Stella E.³ (AUTHOR)

• Source: BMC Genomics. 3/12/2022, Vol. 23 Issue 1, p1-8. 8p.

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Phylogenetic microbiota profiling in fecal samples depends on combination of sequencing depth and choice of NGS analysis method.

• Authors : Rajan, Sukithar K.¹; Lindqvist, Mårten¹; Brummer, Robert Jan¹

Subjects: *HUMAN microbiota; *GUT microbiome; *COMPUTATIONAL biology

• Source: PLoS ONE. 9/17/2019, Vol. 14 Issue 9, p1-17. 17p.

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Solving repeat problems in shotgun sequencing

• Authors : Arner, Erik;

Subjects: MEDICAL AND HEALTH SCIENCES; MEDICIN OCH HÄLSOVETENSKAP; Shotgun sequencing

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BBMerge – Accurate paired shotgun read merging via overlap.

• Authors : Bushnell, Brian¹; Rood, Jonathan²; Singer, Esther¹

Subjects: *SHOTGUN sequencing; *GENE mapping; *NUCLEOTIDE sequencing

• Source: PLoS ONE. 10/26/2017, Vol. 12 Issue 10, p1-15. 15p.

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Application of metagenomic shotgun sequencing to detect vector-borne pathogens in clinical blood samples

• Authors : Prakhar Vijayvargiya; Nicholas Chia; Matthew Thoendel

Subjects: 0301 basic medicine; Plasmodium; Disease Vectors

• Source: PLoS ONEPLoS ONE, Vol 14, Iss 10, p e0222915 (2019)

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Integrated shotgun sequencing and bioinformatics pipeline allows ultra-fast mitogenome recovery and confirms substantial gene rearrangements in Australian freshwater crayfishes.

• Authors : Han Ming Gan¹ ; Schultz, Mark B.² ; Austin, Christopher M.¹

• Source: BMC Evolutionary Biology. 2014, Vol. 14 Issue 1, p1-16. 16p.

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Optimal assembly for high throughput shotgun sequencing.

• Authors : Bresler, Guy¹ ; Bresler, Ma'ayan¹; Tse, David¹

• Source: BMC Bioinformatics. 2013, Vol. 14 Issue Suppl 5, p1-13. 13p. 4 Diagrams, 5 Graphs.

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