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Deconvolution and inference of spatial communication through optimization algorithm for spatial transcriptomics.

• Authors : Wang Z; Key Laboratory of Systems Health Science of Zhejiang Province, School of Life Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou, 310024, China.; Liu Y

Subjects: Algorithms* ; Transcriptome* ; Gene Expression Profiling*/Gene Expression Profiling*/Gene Expression Profiling*/methods

• Source: Communications biology [Commun Biol] 2025 Feb 14; Vol. 8 (1), pp. 235. Date of Electronic Publication: 2025 Feb 14.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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scMSI: Accurately inferring the sub-clonal Micro-Satellite status by an integrated deconvolution model on length spectrum.

• Authors : Liu Y; School of Computer Science and Technology, Xi'an Jiaotong University, Xi'an, China.; Chen Y

Subjects: Algorithms* ; Bayes Theorem* ; Microsatellite Instability*

• Source: PLoS computational biology [PLoS Comput Biol] 2024 Dec 02; Vol. 20 (12), pp. e1012608. Date of Electronic Publication: 2024 Dec 02 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Deconvolution from bulk gene expression by leveraging sample-wise and gene-wise similarities and single-cell RNA-Seq data.

• Authors : Wang C; Department of Automation, Xiamen University, Xiamen, China.; Lin Y

Subjects: Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods ; RNA-Seq*/RNA-Seq*/RNA-Seq*/methods ; Algorithms*

• Source: BMC genomics [BMC Genomics] 2024 Sep 18; Vol. 25 (1), pp. 875. Date of Electronic Publication: 2024 Sep 18.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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imply: improving cell-type deconvolution accuracy using personalized reference profiles.

• Authors : Meng G; Department of Population and Quantitative Health Sciences, Case Western Reserve University, Cleveland, 44106, OH, USA.; Pan Y

Subjects: Algorithms* ; Parkinson Disease*/Parkinson Disease*/Parkinson Disease*/genetics; Humans

• Source: Genome medicine [Genome Med] 2024 Apr 29; Vol. 16 (1), pp. 65. Date of Electronic Publication: 2024 Apr 29.Publisher: BioMed Central Country of Publication: England NLM ID: 101475844 Publication Model: Electronic Cited Medium: Internet ISSN: 1756-994X

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Show-through removal with sparsity-based blind deconvolution.

• Authors : Kawakami S; Degree Programs in Systems and Information Engineering, Graduate School of Science and Technology, University of Tsukuba, Tsukuba, Japan.; Kudo H

Subjects: Algorithms* ; Image Processing, Computer-Assisted*/Image Processing, Computer-Assisted*/Image Processing, Computer-Assisted*/methods

• Source: PloS one [PLoS One] 2024 Jun 12; Vol. 19 (6), pp. e0305208. Date of Electronic Publication: 2024 Jun 12 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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ChromaFactor: Deconvolution of single-molecule chromatin organization with non-negative matrix factorization.

• Authors : Gunsalus, Laura; Keiser, Michael; Pollard, Katherine

Subjects: Chromatin; Computational Biology; Humans

• Source: PLoS Computational Biology. 21(2)

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scAnno: a deconvolution strategy-based automatic cell type annotation tool for single-cell RNA-sequencing data sets.

• Authors : Liu H; State Key Laboratory of Digital Medical Engineering, School of Biological Science & Medical Engineering, Southeast University, Nanjing, 210096, China.; Li H

Subjects: Software* ; Algorithms*; Animals

• Source: Briefings in bioinformatics [Brief Bioinform] 2023 May 19; Vol. 24 (3).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN:

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Improving axial resolution based on the deconvolution recovery method combined with adaptive weighting techniques for ultrasound imaging.

• Authors : Pan J; School of Instrument Science and Opto-electronics Engineering, Hefei University of Technology, Hefei, Anhui, China.; Zhang C

Subjects: Algorithms* ; Image Processing, Computer-Assisted*/Image Processing, Computer-Assisted*/Image Processing, Computer-Assisted*/methods; Humans

• Source: Technology and health care : official journal of the European Society for Engineering and Medicine [Technol Health Care] 2023; Vol. 31 (1), pp. 217-237.Publisher: SAGE Publications Country of Publication: Netherlands NLM ID: 9314590 Publication Model: Print Cited Medium: Internet ISSN: 1878-7401

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Deconvolution beamforming based on a fast gradient algorithm for sound source localization.

• Authors : Zan, Ming¹ (AUTHOR); Xu, Zhongming¹ (AUTHOR) ; Zhang, Zhifei¹ (AUTHOR)

• Source: Journal of Low Frequency Noise, Vibration & Active Control. Jun2023, Vol. 42 Issue 2, p703-718. 16p.

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An Optimal Subspace Deconvolution Algorithm for Robust and High-Resolution Beamforming.

• Authors : Su X; College of Biomedical Engineering & Instrument Science, Zhejiang University, Hangzhou 310058, China.; Miao Q

Subjects: Algorithms* ; Noise*; Signal-To-Noise Ratio

• Source: Sensors (Basel, Switzerland) [Sensors (Basel)] 2022 Mar 17; Vol. 22 (6). Date of Electronic Publication: 2022 Mar 17.Publisher: MDPI Country of Publication: Switzerland NLM ID: 101204366 Publication Model: Electronic Cited Medium: Internet ISSN: 1424-8220

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