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CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods

• Authors : Jain, S.; Niroula, A.; Vihinen, M.

Subjects: nucleotide; area under the curve; art

• Source: Genome Biology StemTherapy: National Initiative on Stem Cells for Regenerative Therapy. 25(1)

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Investigation of APE1 and OGG1 expression in chronic hemodialysis patients

• Authors : Rostami M.; Yalin S.F.; Altiparmak M.R.

Subjects: APE1; DNA repair; End-stage renal disease

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DNA damage induced during mitosis undergoes DNA repair synthesis

• Authors : Godinez, Veronica Gomez; Kabbara, Sami; Sherman, Adria

Subjects: Biological Sciences; Environmental Biotechnology; Environmental Sciences

• Source: PLOS ONE. 15(4)

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DNA damage induced during mitosis undergoes DNA repair synthesis.

• Authors : Gomez Godinez, Veronica; Kabbara, Sami; Sherman, Adria

Subjects: Cell Line; Animals; Potoroidae

• Source: PloS one. 15(4)

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RecA finds homologous DNA by reduced dimensionality search

• Authors : Wiktor, J.; Gynnå, A. H.; Leroy, P.

Subjects: cell; DNA; fluorescence

• Source: Nature. 597(7876):426-429

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Dipeptidyl peptidase 9 triggers BRCA2 degradation and promotes DNA damage repair

• Authors : Bolgi, Oguz; Silva-Garcia, Maria; Ross, Breyan

Subjects: info:eu-repo/classification/ddc; EMBO13; EMBO31

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Influence of single nucleotide polymorphisms among cigarette smoking and non-smoking patients with coronary artery disease, urinary bladder cancer and lung cancer

• Authors : Lewin, N. L.; Karlsson, J. -E; Robinsson, D.

Subjects: cytotoxic T lymphocyte antigen 4; DNA; DNA repair protein XRCC1

• Source: PLOS ONE. 16

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Prenatal phenotype of PNKP-related primary microcephaly associated with variants affecting both the FHA and phosphatase domain

• Authors : Neuser, Sonja; krey, ilona; Schwan, Annemarie

Subjects: Female [MeSH]; Prenatal Diagnosis [MeSH]; Adult [MeSH]

• Source: http://lobid.org/resources/99370671030206441#!, 30(1):101-110.

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Small-molecule activation of OGG1 increases oxidative DNA damage repair by gaining a new function

• Authors : Michel, M.; Scaletti, E.R.; Stenmark, P.

Subjects: 8 oxoguanine DNA glycosylase 1; DNA glycosyltransferase; glycine

• Source: Science. 376(6600):1471-1476

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Biogenesis of iron–sulfur clusters and their role in DNA metabolism

• Authors : Shi, Ruifeng; Hou, Wenya; Wang, Zhao-Qi

Subjects: article; ScholarlyArticle; ddc:570

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Active DNA demethylation promotes cell fate specification and the DNA damage response

• Authors : Dongpeng Wang; Wei Wu; Elsa Callen

Subjects: Neurons; Multidisciplinary; DNA Repair

• Source: Science

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Nucleotide excision repair in chronic neurodegenerative diseases

• Authors : Sepe, Sara; Payan-Gomez, Cesar; Milanese, Chiara

Subjects: Aging; Alzheimer disease; Anatomical variation

• Source: instname:Universidad del Rosario ; reponame:Repositorio Institucional EdocUR

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On the tumor risk from dental diagnostic X-ray exposure

• Authors : Jargin S.V.

Subjects: Article; brain cancer; brain tumor

• Source: Annals of Oncology

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Extrachromosomal Circular DNA: Current Knowledge and Implications for CNS Aging and Neurodegeneration

• Authors : Ain, Quratul; Schmeer, Christian; Wengerodt, Diane

Subjects: article; ScholarlyArticle; ddc:610

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DNA repair inhibitors sensitize cells differently to high and low LET radiation

• Authors : Christoph A. Schatz; Andreas Sutter; Kristina Bannik

Subjects: Cell biology; Radiation-Sensitizing Agents; Cell cycle checkpoint

• Source: Scientific Reports, Vol 11, Iss 1, Pp 1-11 (2021)Scientific Reports

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piR-39980 mediates doxorubicin resistance in fibrosarcoma by regulating drug accumulation and DNA repair

• Authors : Neha Jain; Bibekanand Mallick; Basudeb Das

Subjects: DNA Repair; DNA repair; DNA damage

• Source: Communications Biology, Vol 4, Iss 1, Pp 1-18 (2021)Communications Biology

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The histone H3.1 variant regulates TONSOKU-mediated DNA repair during replication

• Authors : Hossein Davarinejad; Yi-Chun Huang; Benoit Mermaz

Subjects: DNA Replication; Multidisciplinary; DNA, Plant

• Source: ScienceDavarinejad, H, Huang, Y-C, Mermaz, B, Leblanc, C, Poulet, A, Thomson, G, Joly, V, Muñoz, M, Arvanitis-Vigneault, A, Valsakumar, D, Villarino, G, Ross, A, Rotstein, B H, Alarcon, E I,

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A New Standard DNA Damage (SDD) Data Format

• Authors : Schuemann, J.; Mcnamara, A.L.; Warmenhoven, J.W. ...

Subjects: Article; cell cycle phase; cell proliferation

• Source: ISSN: 0033-7587 ; Radiation Research ; https://hal.science/hal-01999036 ; Radiation Research, 2019, 191 (1), pp.76-92. ⟨10.1667/RR15209.1⟩.

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In vitro cellular and proteome assays identify Wnt pathway and CDKN2A-regulated senescence affected in mesenchymal stem cells from mice after a chronic LD gamma irradiation in utero

• Authors : Martina Schuster; Gargi Tewary; Xuanwen Bao

Subjects: 0301 basic medicine; Male; Proteomics

• Source: Radiation and Environmental BiophysicsRadiat. Environ. Biophys. 60, 397-410 (2021)

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APOBEC3G rescues cells from the deleterious effects of DNA damage

• Authors : Alexander Botvinnik; Elena Britan-Rosich; Udy Olshevsky

Subjects: 0301 basic medicine; Genetically modified mouse; Skin Neoplasms

• Source: The FEBS Journal. 288:6063-6077

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A genome-wide portrait of pervasive drug contaminants

• Authors : Joseph Uche Ogbede; Corey Nislow; Guri Giaever

Subjects: 0301 basic medicine; Nitrosamines; DNA Repair

• Source: Scientific Reports, Vol 11, Iss 1, Pp 1-16 (2021)Scientific Reports

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Ovarian toxicity of carboplatin and paclitaxel in mouse carriers of mutation in BRIP1 tumor suppressor gene

• Authors : Ntemou, E.; Vidal, P. Diaz; Alexandri, C. ...

Subjects: Heterozygote; DNA Repair; Paclitaxel

• Source: Scientific Reports, Vol 12, Iss 1, Pp 1-13 (2022)Scientific Reports

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Mechanism of action of nucleotide excision repair machinery

• Authors : Areetha D'Souza; Alexandra M. Blee; Walter J. Chazin

Subjects: enzymes and coenzymes (carbohydrates); congenital, hereditary, and neonatal diseases and abnormalities; Genome

• Source: Biochem Soc Trans

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A novel assay for screening WIP1 phosphatase substrates in nuclear extracts

• Authors : Kamila Burdova; René H. Medema; Matous Palek

Subjects: 0301 basic medicine; DNA Repair; DNA repair

• Source: The FEBS Journal. 288:6035-6051

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Effect of cryopreservation on DNA damage and DNA repair activity in human blood samples in the comet assay

• Authors : Florian Seyfried; Helga Stopper; August Heidland

Subjects: 0301 basic medicine; Aphidicolin; DNA Repair

• Source: Archives of Toxicology

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Particulate Hexavalent Chromium Inhibits E2F1 Leading to Reduced RAD51 Nuclear Foci Formation in Human Lung Cells

• Authors : Ke Jian Liu; Rachel M. Speer; Tayler J. Croom-Perez

Subjects: Chromium; 0301 basic medicine; DNA Repair

• Source: Toxicol Sci

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SWI/SNF chromatin remodeling complex is required for initiation of sex-dependent differentiation in mouse germline

• Authors : Toshiaki Ito; Atsuki Osada; Masami Ohta

Subjects: Male; endocrine system; DNA Repair

• Source: Scientific Reports, Vol 11, Iss 1, Pp 1-13 (2021)Scientific Reports

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Activation of efficient DNA repair mechanisms after photon and proton irradiation of human chondrosarcoma cells

• Authors : Birgit Lohberger; Dietmar Glänzer; Nicole Eck

Subjects: Cell death; Cell biology; Time Factors

• Source: Scientific Reports, Vol 11, Iss 1, Pp 1-13 (2021)Scientific Reports

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FAN1, a DNA Repair Nuclease, as a Modifier of Repeat Expansion Disorders

• Authors : Gagan B. Panigrahi; Jean-Yves Masson; Amit Laxmikant Deshmukh ...

Subjects: 0301 basic medicine; DNA Repair; DNA repair

• Source: Journal of Huntington's Disease

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DNA Repair in Huntington’s Disease and Spinocerebellar Ataxias: Somatic Instability and Alternative Hypotheses

• Authors : Carlos Barba-Bazan; Claudia L.K. Hung; Ray Truant

Subjects: 0301 basic medicine; DNA Repair; DNA damage

• Source: Journal of Huntington's Disease

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Ribonucleotide incorporation into DNA during DNA replication and its consequences

• Authors : Zhi-Xiong Zhou; Thomas A. Kunkel; Jessica S. Williams

Subjects: DNA Replication; Nuclear gene; Ribonucleotide

• Source: Crit Rev Biochem Mol Biol

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Construction of a nine DNA repair-related gene prognostic classifier to predict prognosis in patients with endometrial carcinoma

• Authors : Guoliang Cui; Yan Zhang; Jinhui Liu

Subjects: 0301 basic medicine; Oncology; Cancer Research

• Source: BMC Cancer, Vol 21, Iss 1, Pp 1-15 (2021)BMC Cancer

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Dual function of HPF1 in the modulation of PARP1 and PARP2 activities

• Authors : Tatyana A. Kurgina; Konstantin N. Naumenko; N. A. Moor

Subjects: DNA damage; QH301-705.5; Poly ADP ribose polymerase

• Source: Communications Biology, Vol 4, Iss 1, Pp 1-11 (2021)Communications Biology

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Loss of p53 suppresses replication stress-induced DNA damage in ATRX-deficient neuroblastoma

• Authors : Jesmin Akter; Ryuichi P. Sugino; Tomoko Wada

Subjects: Cancer Research; Cell cycle checkpoint; DNA repair

• Source: Oncogenesis, Vol 10, Iss 11, Pp 1-12 (2021)Oncogenesis

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Arabidopsis thaliana PrimPol is a primase and lesion bypass DNA polymerase with the biochemical characteristics to cope with DNA damage in the nucleus, mitochondria, and chloroplast

• Authors : Alfredo Cruz-Ramírez; Paola L. García-Medel; Alma Fuentes-Pascacio

Subjects: DNA Replication; DNA Repair; DNA polymerase

• Source: Scientific Reports, Vol 11, Iss 1, Pp 1-14 (2021)Scientific Reports

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Optimized design parameters for CRISPR Cas9 and Cas12a homology-directed repair

• Authors : Jessica Woodley; Shuqi Yan; Matthew S. McNeill

Subjects: Computer science; Science; CRISPR-Associated Proteins

• Source: Scientific Reports, Vol 11, Iss 1, Pp 1-15 (2021)Scientific Reports

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An evaluation of the differences in DNA damage in lymphocytes and repair efficiencies in patients with schizophrenia and schizoaffective disorder

• Authors : Topak, Osman Zülkif; Özdel, Osman Ä°smail; Dodurga, Y.

Subjects: DNA damage; DNA repair; Schizoaffective disorder

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Cannabidiol enhances cytotoxicity of anti-cancer drugs in human head and neck squamous cell carcinoma

• Authors : Yoon Young Go; Su Ra Kim; Jae-Jun Song

Subjects: Programmed cell death; DNA Repair; DNA repair

• Source: Scientific Reports, Vol 10, Iss 1, Pp 1-11 (2020)Scientific Reports

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Functional impacts of the ubiquitin–proteasome system on DNA damage recognition in global genome nucleotide excision repair

• Authors : Kaoru Sugasawa; Mayumi Yuasa-Sunagawa; Masayuki Kusakabe

Subjects: Proteasome Endopeptidase Complex; RAD23B; DNA Repair

• Source: Scientific Reports, Vol 10, Iss 1, Pp 1-15 (2020)Scientific Reports

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Molecular contribution of BRCA1 and BRCA2 to genome instability in breast cancer patients: review of radiosensitivity assays

• Authors : Majid Zaki-Dizaji; Mojdeh Matloubi; Maral Ranjbar

Subjects: 0301 basic medicine; Genome instability; DNA damage

• Source: Biological Procedures Online, Vol 22, Iss 1, Pp 1-28 (2020)

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Harnessing endogenous repair mechanisms for targeted gene knock-in of bovine embryos

• Authors : Bret R. McNabb; Sadie L. Hennig; Jason C. Lin

Subjects: DNA End-Joining Repair; Microinjections; DNA Repair

• Source: Scientific Reports, Vol 10, Iss 1, Pp 1-10 (2020)Scientific reports, vol 10, iss 1Scientific Reports

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Inhibition of non-homologous end joining of gamma ray-induced DNA double-strand breaks by cAMP signaling in lung cancer cells

• Authors : Sung Eun Noh; Yong Sung Juhnn

Subjects: 0301 basic medicine; DNA End-Joining Repair; DNA Repair

• Source: Scientific Reports, Vol 10, Iss 1, Pp 1-15 (2020)Scientific Reports

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Functional complementation of ataxia-telangiectasia group D (AT-D) cells by microcell-mediated chromosome transfer and mapping of the AT-D locus to the region 11q22-23.

• Authors : Lambert, C; Schultz, RA; Smith, M

Subjects: Hybrid Cells; Chromosomes; Human

• Source: Proceedings of the National Academy of Sciences of the United States of America. 88(13)

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Genome-wide CRISPR screens reveal cyclin C as synthetic survival target of BRCA2

• Authors : Zhongming Zhao; Junjie Chen; Chao Wang

Subjects: DNA Replication; 0301 basic medicine; Cell Survival

• Source: Nucleic Acids Research

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PARP1 and CHK1 coordinate PLK1 enzymatic activity during the DNA damage response to promote homologous recombination-mediated repair

• Authors : Ji Liao; Hailong Wang; Jing Bian

Subjects: 0301 basic medicine; Poly Adenosine Diphosphate Ribose; Glycoside Hydrolases

• Source: Nucleic Acids Research

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Comparative analysis of 1152 African-American and European-American men with prostate cancer identifies distinct genomic and immunological differences

• Authors : Dimple Chakravarty; Randy V. Bradley; Ashutosh K. Tewari

Subjects: Male; 0301 basic medicine; Oncology

• Source: Communications Biology, Vol 4, Iss 1, Pp 1-9 (2021)Communications Biology

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PD-L1 upregulation is associated with activation of the DNA double-strand break repair pathway in patients with colitic cancer

• Authors : Yuta Shibasaki; Yoko Motegi; Makoto Sakai

Subjects: Cancer microenvironment; Adult; Male

• Source: Scientific Reports, Vol 11, Iss 1, Pp 1-10 (2021)Scientific Reports

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DNA repair enzymes in sunscreens and their impact on photoageing—A systematic review

• Authors : Lars-Peter Kamolz; Iris Zalaudek; Robert R. Müllegger ...

Subjects: 0301 basic medicine; DNA Repair; DNA damage

• Source: Photodermatology, Photoimmunology & Photomedicine

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Mutational signature SBS8 predominantly arises due to late replication errors in cancer

• Authors : Arnav Rastogi; Yaqun Wang; Subhajyoti De

Subjects: DNA Replication; DNA Repair; DNA repair

• Source: Communications Biology, Vol 3, Iss 1, Pp 1-10 (2020)Communications Biology

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XRN2 interactome reveals its synthetic lethal relationship with PARP1 inhibition

• Authors : Talysa Viera; Megha Khandelwal; Julio C. Morales

Subjects: 0301 basic medicine; Genome instability; DNA Replication

• Source: Scientific Reports, Vol 10, Iss 1, Pp 1-15 (2020)Scientific Reports

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