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Scalable Reference Genome Assembly from Compressed Pan-Genome Index with Spark

• Authors : Maarala, Altti Ilari; Arasalo, Ossi; Valenzuela, Daniel ...

Subjects: Computer and information sciences; Genome assembly; Pan-genome

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Protein Sequence Diversity in the Pan-Genome of Soy

• Authors : Prigozhin, Daniil M; Rangavajjhala, Sanjay; Krasileva, Ksenia V

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Identification of horizontal genes transfer elements across strains inhabiting the same niche using pan-genome analysis

• Authors : Schwarzerová, J.; Čejková, D.

Subjects: Comparative Genomics; Core Genome; Antibiotics Resistance

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Faster Pan-Genome Construction for Efficient Differentiation of Naturally Occurring and Engineered Plasmids with Plaster

• Authors : Wang, Qi; Elworth, R. A. Leo; Liu, Tian Rui ...

Subjects: comparative genomics; sequence alignment; pan-genome

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Presentation_1_Prediction of Host-Specific Genes by Pan-Genome Analyses of the Korean Ralstonia solanacearum Species Complex.PPTX

• Authors : Heejung Cho; Eun-Sung Song; Sunggi Heu

Subjects: Microbiology; Microbial Genetics; Microbial Ecology

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Presentation_1_GET_PHYLOMARKERS, a Software Package to Select Optimal Orthologous Clusters for Phylogenomics and Inferring Pan-Genome Phylogenies, Used for a Critical Geno-Taxonomic Revision of the Genus Stenotrophomonas.pdf

• Authors : Pablo Vinuesa; Luz E. Ochoa-Sánchez; Bruno Contreras-Moreira

Subjects: Microbiology; Microbial Genetics; Microbial Ecology

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Presentation_2_Genome Sequencing and Pan-Genome Analysis of 23 Corallococcus spp. Strains Reveal Unexpected Diversity, With Particular Plasticity of Predatory Gene Sets.PPTX

• Authors : Paul G. Livingstone; Russell M. Morphew; David E. Whitworth

Subjects: Microbiology; Microbial Genetics; Microbial Ecology

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Insyght : Analyse evolutionary conserved CDS, orthologs, syntenies, pan-genome, fusion, etc., for your bacteria of interest

• Authors : Lacroix, Thomas; Loux, Valentin; Lorenzo, Jonathan ...

Subjects: conserved synteny; orthology; multiple bacterial genomesParis; France

• Source: Annual Research in Computational Molecular Biology (RECOMB) ; https://hal.inrae.fr/hal-02736501 ; Annual Research in Computational Molecular Biology (RECOMB), Apr 2018, Paris, France. , 2018 ;

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Presentation_1_Pan-Genome of the Genus Streptomyces and Prioritization of Biosynthetic Gene Clusters With Potential to Produce Antibiotic Compounds.pdf

• Authors : Carlos Caicedo-Montoya (11494582); Monserrat Manzo-Ruiz (11494585); Rigoberto Ríos-Estepa (4605424)

Subjects: Microbiology; Microbial Genetics; Microbial Ecology

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Presentation_1_Properties of Modestobacter deserti sp. nov., a Kind of Novel Phosphate-Solubilizing Actinobacteria Inhabited in the Desert Biological Soil Crusts.pdf

• Authors : Zhu-Ming Jiang (11652685); Bing-Huo Zhang (3044739); Hong-Min Sun (11652688)

Subjects: Microbiology; Microbial Genetics; Microbial Ecology

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