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Academic Journal

scBoolSeq: Linking scRNA-seq statistics and Boolean dynamics.

Subjects: Computational Biology*/Computational Biology*/Computational Biology*/methods ; Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods ; Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/statistics & numerical data

  • Source: PLoS computational biology [PLoS Comput Biol] 2024 Jul 08; Vol. 20 (7), pp. e1011620. Date of Electronic Publication: 2024 Jul 08 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Spatiotemporal analysis and seasonality of tuberculosis in Pudong New Area of Shanghai, China, 2014-2023.

  • Authors : Pan S; Tuberculosis, AIDS and STD Control Department, Shanghai Pudong New Area Center for Disease Control and Prevention, Shanghai, China.; Chen L

Subjects: Spatio-Temporal Analysis* ; Seasons* ; Tuberculosis*/Tuberculosis*/Tuberculosis*/epidemiology

  • Source: BMC infectious diseases [BMC Infect Dis] 2024 Jul 31; Vol. 24 (1), pp. 761. Date of Electronic Publication: 2024 Jul 31.Publisher: BioMed Central Country of Publication: England NLM ID: 100968551 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2334

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Academic Journal

Feature selection followed by a novel residuals-based normalization that includes variance stabilization simplifies and improves single-cell gene expression analysis.

  • Authors : Singh A; Center for Systems and Computational Biology, Rutgers Cancer Institute of New Jersey, Rutgers University, New Brunswick, NJ, USA. .; Khiabanian H

Subjects: Gene Expression Profiling*/Gene Expression Profiling*/Gene Expression Profiling*/methods ; Single-Cell Gene Expression Analysis*/Single-Cell Gene Expression Analysis*/Single-Cell Gene Expression Analysis*/methods; Humans

  • Source: BMC bioinformatics [BMC Bioinformatics] 2024 Jul 30; Vol. 25 (1), pp. 248. Date of Electronic Publication: 2024 Jul 30.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

[Spatial and temporal distribution characteristics research of esophageal cancer in China].

  • Authors : Lai SP; School of Public Health, Wenzhou Medical University, Wenzhou 325035, China.; Su HM

Subjects: Esophageal Neoplasms*/Esophageal Neoplasms*/Esophageal Neoplasms*/epidemiology ; Esophageal Neoplasms*/Esophageal Neoplasms*/Esophageal Neoplasms*/pathology ; Spatio-Temporal Analysis*

  • Source: Zhonghua zhong liu za zhi [Chinese journal of oncology] [Zhonghua Zhong Liu Za Zhi] 2024 Jul 23; Vol. 46 (7), pp. 657-662.Publisher: Chinese Medical Association Country of Publication: China NLM ID: 7910681 Publication Model: Print Cited Medium: Print ISSN: 0253-3766

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Academic Journal

CAbiNet: joint clustering and visualization of cells and genes for single-cell transcriptomics.

  • Authors : Zhao Y; Department of Computational Molecular Biology, Max Planck Institute for Molecular Genetics, Ihnestraße 63-73, 14195 Berlin, Germany.; Department of Pharmacology, School of Medicine, Southern University of Science and Technology, 1088 Xueyuan Avenue, Shenzhen 518055, Guangdong, P.R. China.

Subjects: Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods ; Algorithms* ; Transcriptome*

  • Source: Nucleic acids research [Nucleic Acids Res] 2024 Jul 22; Vol. 52 (13), pp. e57.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

Chick sexing based on the blood analysis using Raman spectroscopy.

  • Authors : Matsumoto S; Institute of Agricultural and Life Sciences, Academic Assembly, Shimane University, 1060 Nishikawatsu, Matsue, Shimane, 690-8504, Japan.; Ogino A

Subjects: Spectrum Analysis, Raman*/Spectrum Analysis, Raman*/Spectrum Analysis, Raman*/methods ; Chickens*/Chickens*/Chickens*/blood ; Erythrocytes*/Erythrocytes*/Erythrocytes*/metabolism

  • Source: Scientific reports [Sci Rep] 2024 Jul 11; Vol. 14 (1), pp. 15999. Date of Electronic Publication: 2024 Jul 11.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Prediction of COD in industrial wastewater treatment plant using an artificial neural network.

Subjects: Neural Networks, Computer* ; Wastewater*/Wastewater*/Wastewater*/chemistry ; Biological Oxygen Demand Analysis*

  • Source: Scientific reports [Sci Rep] 2024 Jun 14; Vol. 14 (1), pp. 13750. Date of Electronic Publication: 2024 Jun 14.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Whole transcriptome analysis to identify non-coding RNA regulators and hub genes in sperm of non-obstructive azoospermia by microarray, single-cell RNA sequencing, weighted gene co-expression network analysis, and mRNA-miRNA-lncRNA interaction analysis.

  • Authors : Karoii DH; Department of Cell and Molecular Biology, School of Biology, College of Science, University of Tehran, Tehran, Iran.; Faculty of Biotechnology, Amol University of Special Modern Technologies, Amol, Iran.

Subjects: Azoospermia*/Azoospermia*/Azoospermia*/genetics ; Azoospermia*/Azoospermia*/Azoospermia*/metabolism ; Single-Cell Analysis* Azoospermia, Nonobstructive

  • Source: BMC genomics [BMC Genomics] 2024 Jun 11; Vol. 25 (1), pp. 583. Date of Electronic Publication: 2024 Jun 11.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Academic Journal

crossnma: An R package to synthesize cross-design evidence and cross-format data using network meta-analysis and network meta-regression.

  • Authors : Hamza T; Institute of Social and Preventive Medicine, University of Bern, Bern, Switzerland. .; Graduate School for Health Sciences, University of Bern, Bern, Switzerland. .

Subjects: Network Meta-Analysis* ; Bayes Theorem* ; Software*

  • Source: BMC medical research methodology [BMC Med Res Methodol] 2024 Aug 05; Vol. 24 (1), pp. 169. Date of Electronic Publication: 2024 Aug 05.Publisher: BioMed Central Country of Publication: England NLM ID: 100968545 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2288

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Academic Journal

scaDA: A novel statistical method for differential analysis of single-cell chromatin accessibility sequencing data.

  • Authors : Zhao F; Department of Biostatistics, University of Florida, Gainesville, Florida, United States of America.; Ma X

Subjects: Chromatin*/Chromatin*/Chromatin*/genetics ; Chromatin*/Chromatin*/Chromatin*/metabolism ; Chromatin*/Chromatin*/Chromatin*/chemistry

  • Source: PLoS computational biology [PLoS Comput Biol] 2024 Aug 02; Vol. 20 (8), pp. e1011854. Date of Electronic Publication: 2024 Aug 02 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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