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KEGG orthology prediction of bacterial proteins using natural language processing.

• Authors : Chen, Jing^1,2 (AUTHOR); Wu, Haoyu¹ (AUTHOR); Wang, Ning¹ (AUTHOR)

• Source: BMC Bioinformatics. 4/11/2024, Vol. 25 Issue 1, p1-18. 18p.

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Visualizing the invisible: novel approaches to visualizing bacterial proteins and host-pathogen interactions

• Authors : Moirangthem Kiran Singh; Linda J. Kenney

Subjects: host-pathogen interactions; protein labeling; bacterial proteins

• Source: Frontiers in Bioengineering and Biotechnology, Vol 12 (2024)

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KEGG orthology prediction of bacterial proteins using natural language processing

• Authors : Jing Chen; Haoyu Wu; Ning Wang

Subjects: KEGG orthology; Protein function prediction; Protein language model

• Source: BMC Bioinformatics, Vol 25, Iss 1, Pp 1-18 (2024)

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Study protocol: The role of milk matrix lipids in programming the immunoreactivity of proteins derived from lactic acid bacteria.

• Authors : Ogrodowczyk, Anna Maria¹ (AUTHOR) ; Romaszko, Ewa² (AUTHOR)

Subjects: *LACTIC acid bacteria; *BACTERIAL proteins; *DIETARY proteins

• Source: PLoS ONE. 5/20/2024, Vol. 19 Issue 5, p1-17. 17p.

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RopB-regulated SpeB cysteine protease degrades extracellular vesicles-associated streptolysin O and bacterial proteins from group A Streptococcus .

• Authors : Chiang-Ni C; Department of Microbiology and Immunology, College of Medicine, Chang Gung University, Taoyuan, Taiwan.; Graduate Institute of Biomedical Sciences, College of Medicine, Chang Gung University, Taoyuan, Taiwan.

Subjects: Cysteine Proteases* ; Extracellular Vesicles*; Streptococcus pyogenes/Streptococcus pyogenes/Streptococcus pyogenes/genetics

• Source: Virulence [Virulence] 2023 Dec; Vol. 14 (1), pp. 2249784.Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101531386 Publication Model: Print Cited Medium: Internet ISSN:

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Insect-Bacteria interaction: identification of some of the bacterial proteins in the gut of Nezara viridula.

• Authors : Saadati, Mohammad¹ ; Nouripure, Sadaf²

Subjects: *BACTERIAL proteins; *ALIMENTARY canal; *NUTRITION

• Source: Journal of Epigenetics. Winter2022, Vol. 3 Issue 1, p13-19. 7p.

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Exploring the fragmentation efficiency of proteins analyzed by MALDI-TOF-TOF tandem mass spectrometry using computational and statistical analyses.

• Authors : Park, Jihyun^1,2 (AUTHOR) ; Fagerquist, Clifton K.¹ (AUTHOR)

Subjects: *TANDEM mass spectrometry; *MATRIX-assisted laser desorption-ionization; *PROTEIN structure prediction

• Source: PLoS ONE. 5/3/2024, Vol. 19 Issue 5, p1-17. 17p.

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Optimization of proteomics sample preparation for identification of host and bacterial proteins in mouse feces.

• Authors : Baniasad, Maryam¹ (AUTHOR); Kim, Yongseok¹ (AUTHOR); Shaffer, Michael² (AUTHOR)

Subjects: *BACTERIAL proteins; *PROTEOMICS; *SODIUM dodecyl sulfate

• Source: Analytical & Bioanalytical Chemistry. Mar2022, Vol. 414 Issue 7, p2317-2331. 15p.

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The Dynamics of OXA-23 β-Lactamase from Acinetobacter baumannii.

• Authors : Arrigoni, Roberto¹ (AUTHOR) ; Ballini, Andrea² (AUTHOR) ; Santacroce, Luigi³ (AUTHOR)

Subjects: *DRUG resistance in bacteria; *ACINETOBACTER baumannii; *CARBAPENEM-resistant bacteria

• Source: International Journal of Molecular Sciences. Dec2023, Vol. 24 Issue 24, p17527. 12p.

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Rv0100: An essential acyl carrier protein from M. tuberculosis important in dormancy.

• Authors : Gutka HJ; Institute for Tuberculosis Research, College of Pharmacy, University of Illinois at Chicago, Chicago, Illinois, United States of America.; Bondoc JMG

Subjects: Mycobacterium tuberculosis*/Mycobacterium tuberculosis*/Mycobacterium tuberculosis*/metabolism ; Mycobacterium tuberculosis*/Mycobacterium tuberculosis*/Mycobacterium tuberculosis*/genetics ; Mycobacterium tuberculosis*/Mycobacterium tuberculosis*/Mycobacterium tuberculosis*/pathogenicity

• Source: PloS one [PLoS One] 2024 Jun 07; Vol. 19 (6), pp. e0304876. Date of Electronic Publication: 2024 Jun 07 (Print Publication: 2024).Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet

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