Source: Nucleic acids research, 49(22), 12622-12633. Oxford University PressNucleic Acids Research, 49, 22, pp. 12622-12633Nucleic Acids Research, 49, 12622-12633Nucleic Acids Research

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Chromatin-contact atlas reveals disorder-mediated protein interactions and moonlighting chromatin-associated RBPs

Authors : Julian A. Zagalak; Mahmoud-Reza Rafiee; Karen Davey

Subjects: Proteomics; Proteome; AcademicSubjects/SCI00010

Source: Nucleic Acids ResearchbioRxiv

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Cockayne syndrome group B protein regulates fork restart, fork progression and MRE11-dependent fork degradation in BRCA1/2-deficient cells

Authors : Nicole L Batenburg; Sofiane Y Mersaoui; John R Walker

Subjects: DNA Replication; musculoskeletal diseases; congenital, hereditary, and neonatal diseases and abnormalities

Source: Nucleic Acids Research

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The human telomeric proteome during telomere replication

Authors : Alexandra Vancevska; Joachim Lingner; Chih-Yi Gabriela Lin

Subjects: DNA Replication; Telomerase; strand synthesis

Source: Nucleic Acids Research

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An integrative NMR-SAXS approach for structural determination of large RNAs defines the substrate-free state of a trans-cleaving Neurospora Varkud Satellite ribozyme

Authors : Pierre Dagenais; Geneviève Desjardins; Pascale Legault

Subjects: Conformational change; Magnetic Resonance Spectroscopy; AcademicSubjects/SCI00010

Source: Nucleic Acids Research

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The structural and functional workings of KEOPS

Authors : Frank Sicheri; Jonah Beenstock

Subjects: Models, Molecular; TRNA modification; Adenosine

Source: Nucleic Acids Research

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Identification of host tRNAs preferentially recognized by the Plasmodium surface protein tRip

Authors : Marta Cela; Philippe Wolff; Magali Frugier ...

Subjects: AcademicSubjects/SCI00010; [SDV]Life Sciences [q-bio]; Plasmodium falciparum

Source: Nucleic Acids ResearchNucleic Acids Research, Oxford University Press, 2021, ⟨10.1093/nar/gkab769⟩

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Key role of a structural water molecule for the specificity of 14F7—An antitumor antibody targeting the NeuGc GM3 ganglioside

Authors : Ernesto Moreno; Kaare Bjerregaard-Andersen; Fana Abraha

Subjects: Models, Molecular; endocrine system; AcademicSubjects/SCI01000

Source: Glycobiology

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Cannabis Glandular Trichome Cell Walls Undergo Remodeling to Store Specialized Metabolites

Authors : Shawn D. Mansfield; Michael G. Hahn; Samuel J. Livingston

Subjects: 0106 biological sciences; Physiology; medicine.medical_treatment

Source: Plant and Cell Physiology. 62:1944-1962

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Nestling behaviour predicts naris deformation in Darwin’s finches parasitized by the avian vampire fly

Authors : Rachael Y. Dudaniec; Sonia Kleindorfer; Lauren K. Common

Subjects: 0106 biological sciences; 0303 health sciences; biology

Source: Biological Journal of the Linnean Society. 134:636-649

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Small-molecule compounds boost genome-editing efficiency of cytosine base editor

Authors : Zongming Song; Qing Li; Chenchen Zhou

Subjects: Zygote; AcademicSubjects/SCI00010; T-Lymphocytes

Source: Nucleic Acids Research

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TDRD3 promotes DHX9 chromatin recruitment and R-loop resolution

Authors : Hyejin Cho; Wei Yuan; Xiwei Wu

Subjects: Tudor domain; Transcription, Genetic; AcademicSubjects/SCI00010

Source: Nucleic Acids Research

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Discovering single nucleotide variants and indels from bulk and single-cell ATAC-seq

Authors : Graham McVicker; Yi Fu; Sélène T. Tyndale

Subjects: AcademicSubjects/SCI00010; Sequencing data; ATAC-seq

Source: Nucleic Acids Research

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Large seasonal fluctuations in whole-tree carbohydrate reserves: is storage more dynamic in boreal ecosystems?

Authors : K G Fleurial; Erin Wiley; C Fermaniuk

Subjects: 0106 biological sciences; 0303 health sciences; Phenology

Source: Ann Bot

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DNA G-quadruplex structures: more than simple roadblocks to transcription?

Authors : Denise Liano; Sabrina Pia Nuccio; Marco Di Antonio ...

Subjects: Transcription, Genetic; AcademicSubjects/SCI00010; 05 Environmental Sciences

Source: Nucleic Acids Research

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RoboCOP: jointly computing chromatin occupancy profiles for numerous factors from chromatin accessibility data

Authors : Jianling Zhong; Trung Q. Tran; Alexander J. Hartemink

Subjects: AcademicSubjects/SCI00010; genetic processes; Saccharomyces cerevisiae

Source: Nucleic Acids Research

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Climate instability causing the decline of a Neotropical savanna lizard population (Squamata: Tropiduridae)

Authors : Guarino R. Colli; Gabriel Henrique de Oliveira Caetano

Subjects: 0106 biological sciences; 0303 health sciences; education.field_of_study

Source: Biological Journal of the Linnean Society. 134:474-485

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A set-valued approach applied to a control problem of tuberculosis with treatment

Authors : Mohamed Elhia; Omar Balatif; Lahoucine Boujallal

Subjects: 0303 health sciences; Mathematical optimization; Control and Optimization

Source: IMA Journal of Mathematical Control and Information. 38:1010-1027

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Golgi-58K can re-localize to late endosomes upon cellular uptake of PS-ASOs and facilitates endosomal release of ASOs

Authors : Hong Sun; Joshua G Nichols; Stanley T. Crooke

Subjects: AcademicSubjects/SCI00010; Endosome; RNase P

Source: Nucleic Acids Research

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Cognate restriction of transposition by piggyBac-like proteins

Authors : Matthew H. Wilson; Wentian Luo; Catherine M Wilson

Subjects: Transposable element; animal structures; Transgene

Source: Nucleic Acids Res

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Follow-up genotoxicity assessment of Ames-positive/equivocal chemicals using the improved thymidine kinase gene mutation assay in DNA repair-deficient human TK6 cells

Authors : Masamitsu Honma; Ryosuke Sato; Maki Nakamura

Subjects: DNA Repair; DNA repair; DNA damage

Source: Mutagenesis. 36:331-338

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Pupal colour plasticity in the butterfly Catopsilia pomona (Lepidoptera: Pieridae)

Authors : Tarunkishwor Yumnam; Ullasa Kodandaramaiah; Birupaksha Banerjee

Subjects: 0106 biological sciences; 0303 health sciences; biology

Source: Biological Journal of the Linnean Society. 134:331-341

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Towards a global investigation of transcriptomic signatures through co-expression networks and pathway knowledge for the identification of disease mechanisms

Authors : Rebeca Queiroz Figueiredo; Tamara Raschka; Martin Hofmann-Apitius

Subjects: Computer science; AcademicSubjects/SCI00010; Context (language use)

Source: Nucleic Acids Research

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MERFISH Enables Mapping of Cellular Diversity with Spatial Context at Subcellular Resolution

Authors : George Emanuel; Jiang He

Subjects: 0303 health sciences; Cell type; Spatial contextual awareness

Source: Microscopy Today. 29:30-33

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iTARGEX analysis of yeast deletome reveals novel regulators of transcriptional buffering in S phase and protein turnover

Authors : Wei-Yun Lai; Huai-Kuang Tsai; Cheng-Fu Kao

Subjects: DNA Replication; Saccharomyces cerevisiae Proteins; Transcription, Genetic

Source: Nucleic Acids Research

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Efficient multiplexed gene regulation in Saccharomyces cerevisiae using dCas12a

Authors : René Verwaal; Klaudia W Ciurkot; Thomas E. Gorochowski

Subjects: AcademicSubjects/SCI00010; CRISPR-Associated Proteins; Green Fluorescent Proteins

Source: Ciurkot, K W, Gorochowski, T E, Roubos, J A & Verwaal, R 2021, ' Efficient multiplexed gene regulation in Saccharomyces cerevisiae using dCas12a ', Nucleic Acids Research, vol. 49, no. 13, gkab529,

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Strand-specific effect of Rad26 and TFIIS in rescuing transcriptional arrest by CAG trinucleotide repeat slip-outs

Authors : Jenny Chong; Jun Xu; Dong Wang

Subjects: musculoskeletal diseases; congenital, hereditary, and neonatal diseases and abnormalities; Saccharomyces cerevisiae Proteins

Source: Nucleic Acids Research

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The synaptonemal complex central region modulates crossover pathways and feedback control of meiotic double-strand break formation

Authors : Hyungseok Choi; Ke Li; Soogil Hong

Subjects: DNA Replication; Saccharomyces cerevisiae Proteins; AcademicSubjects/SCI00010

Source: Nucleic Acids Research

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Stationary and oscillatory localized patterns in ratio-dependent predator–prey systems

Authors : Annette L. Worthy; Ahmed Hussein Msmali; Fahad Al Saadi

Subjects: Hopf bifurcation; Physics; 0303 health sciences

Source: Al Saadi, F S H & Champneys, A R 2021, ' Stationary and oscillatory localized patterns in ratio-dependent predator-prey systems ', IMA Journal of Applied Mathematics, vol. 86, no. 4, pp. 808-827 .

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