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Increasing metadata coverage of SRA BioSample entries using deep learning–based named entity recognition

• Authors : Michelle Dow; Adam R. Klie; S. Mollah

Subjects: Computer science; Sample (statistics); computer.software_genre

• Source: Database: The Journal of Biological Databases and Curation

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Deep learning methods for biomedical named entity recognition: a survey and qualitative comparison.

• Authors : Song B; College of Information Science and Engineering, Hunan University, 2 Lushan S Rd, Yuelu District, 410086, Changsha, China.; Li F

Subjects: Deep Learning*; Data Mining/Data Mining/Data Mining/methods ; Datasets as Topic

• Source: Briefings in bioinformatics [Brief Bioinform] 2021 Nov 05; Vol. 22 (6).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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Biomedical named entity recognition and linking datasets: survey and our recent development.

• Authors : Huang MS; Bioinformatics Program, Taiwan International Graduate Program, Institute of Information Science, Academia Sinica, Taipei, Taiwan.; Lai PT

Subjects: Data Mining*/Data Mining*/Data Mining*/methods ; Information Storage and Retrieval* ; Natural Language Processing*

• Source: Briefings in bioinformatics [Brief Bioinform] 2020 Dec 01; Vol. 21 (6), pp. 2219-2238.Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

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HunFlair: an easy-to-use tool for state-of-the-art biomedical named entity recognition

• Authors : Weber, L.; Sänger, M.; Münchmeyer, J.

Subjects: Cancer Research; Topic 2: Molecular Processes and Therapies

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ChemSpot: A Hybrid System for Chemical Named Entity Recognition

• Authors : Rocktäschel, Tim; Weidlich, Michael; Leser, Ulf

Subjects: ORIGINAL PAPER

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A system for named entity recognition based on local grammars

• Authors : Krstev, Cvetana; Obradovic, Ivan; Utvic, Milos

Subjects: Original Paper

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What makes a gene name? Named entity recognition in the biomedical literature

• Authors : Leser, Ulf; Hakenberg, Jörg

Subjects: Papers

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POSBIOTM--NER: a trainable biomedical named-entity recognition system

• Authors : Song, Yu; Kim, Eunju; Lee, Gary Geunbae

Subjects: DATABASES AND ONTOLOGIES

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Named Entity Recognition for the Mainland Scandinavian Languages

• Authors : Johannessen, Janne Bondi; Hagen, Kristin; Haaland, Åsne

Subjects: Articles

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Chemical–gene relation extraction using recursive neural network

• Authors : Jaewoo Kang; Sangrak Lim

Subjects: 0301 basic medicine; Computer science; computer.software_genre

• Source: Database: The Journal of Biological Databases and Curation

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