نتائج البحث

High-throughput capture of transcription factor-driven epigenome dynamics using PHILO ChIP-seq.

• Authors : Choudhary A; Waksman Institute of Microbiology, Department of Plant Biology, Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA.; Ammari M

Subjects: Arabidopsis*/Arabidopsis*/Arabidopsis*/genetics ; Arabidopsis*/Arabidopsis*/Arabidopsis*/metabolism ; Chromatin Immunoprecipitation Sequencing*/Chromatin Immunoprecipitation Sequencing*/Chromatin Immunoprecipitation Sequencing*/methods

• Source: Nucleic acids research [Nucleic Acids Res] 2024 Dec 11; Vol. 52 (22), pp. e105.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium:

تفاصيل العنوان

A Deconvolution Protocol for ChIP-Seq Reveals Analogous Enhancer Structures on the Mouse and Human Ribosomal RNA Genes

• Authors : Jean-Clement Mars; Marianne Sabourin-Felix; Michel G. Tremblay

Subjects: ChIP-Seq deconvolution; RNA polymerase I (RPI, PolI, Polr1); ribosomal RNA (rRNA) genes

• Source: G3: Genes, Genomes, Genetics, Vol 8, Iss 1, Pp 303-314 (2018)

تفاصيل العنوان

Comparison of ChIP-Seq Data and a Reference Motif Set for Human KRAB C2H2 Zinc Finger Proteins

• Authors : Marjan Barazandeh; Samuel A. Lambert; Mihai Albu

Subjects: KRAB C2H2 zinc finger proteins; endogenous retroelements; DNA-binding motif

• Source: G3: Genes, Genomes, Genetics, Vol 8, Iss 1, Pp 219-229 (2018)

تفاصيل العنوان

Effects of sheared chromatin length on ChIP-seq quality and sensitivity

• Authors : Cheryl A Keller; Alexander Q Wixom; Elisabeth F Heuston

Subjects: Genetics; QH426-470

• Source: G3: Genes, Genomes, Genetics, Vol 11, Iss 6 (2021)

تفاصيل العنوان

Motif elucidation in ChIP-seq datasets with a knockout control.

• Authors : Denisko D; Department of Medical Biophysics, University of Toronto, Toronto, ON M5G 1L7, Canada.; Princess Margaret Cancer Centre, University Health Network, Toronto, ON M5G 1L7, Canada.

• Source: Bioinformatics advances [Bioinform Adv] 2023 Mar 16; Vol. 3 (1), pp. vbad031. Date of Electronic Publication: 2023 Mar 16 (Print Publication: 2023).Publisher: Oxford University Press Country of Publication: England NLM ID: 9918282081306676 Publication Model: eCollection

تفاصيل العنوان

ChIP-AP: an integrated analysis pipeline for unbiased ChIP-seq analysis

• Authors : Jeremiah Suryatenggara; Kol Jia Yong; Danielle E Tenen

Subjects: integrated analysis pipeline; Chromatin Immunoprecipitation; AcademicSubjects/SCI01060

• Source: Briefings in Bioinformatics

تفاصيل العنوان

ReMap 2018: an updated atlas of regulatory regions from an integrative analysis of DNA-binding ChIP-seq experiments

• Authors : Chèneby, Jeanne; Gheorghe, Marius; Artufel, Marie ...

Subjects: ChIP-seq experiments; DNA-binding; Genome browser

• Source: ISSN: 0305-1048.

تفاصيل العنوان

ChIP-Atlas 2021 update: a data-mining suite for exploring epigenomic landscapes by fully integrating ChIP-seq, ATAC-seq and Bisulfite-seq data.

• Authors : Zou Z; Department of Drug Discovery Medicine, Kyoto University Graduate School of Medicine, 53 Shogoin Kawahara-cho, Sakyo-ku, Kyoto 606-8507, Japan.; Kyoto University Graduate Program for Medical Innovation, Yoshida-Konoe-cho, Sakyo-ku, Kyoto 606-8501, Japan.

Subjects: Chromatin Immunoprecipitation Sequencing* ; Epigenomics*/Epigenomics*/Epigenomics*/methods; Animals

• Source: Nucleic acids research [Nucleic Acids Res] 2022 Jul 05; Vol. 50 (W1), pp. W175-W182.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium:

تفاصيل العنوان

ChIP-AP: an integrated analysis pipeline for unbiased ChIP-seq analysis.

• Authors : Suryatenggara J; Cancer Science Institute of Singapore, National University of Singapore, Singapore, 117599, Singapore.; Yong KJ

Subjects: Chromatin Immunoprecipitation Sequencing*; Oligonucleotide Array Sequence Analysis/Oligonucleotide Array Sequence Analysis/Oligonucleotide Array Sequence Analysis/*methods ; Sequence Analysis, DNA/Sequence Analysis, DNA/Sequence Analysis, DNA/*methods

• Source: Briefings in bioinformatics [Brief Bioinform] 2022 Jan 17; Vol. 23 (1).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

تفاصيل العنوان

Novel ChIP-seq simulating program with superior versatility: isChIP.

• Authors : Subkhankulova T; University College London, UK.; Naumenko F

Subjects: Algorithms* ; Chromatin Immunoprecipitation Sequencing* ; Computer Simulation*

• Source: Briefings in bioinformatics [Brief Bioinform] 2021 Jul 20; Vol. 22 (4).Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium:

تفاصيل العنوان