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Academic Journal

Evolution and related pathogenic genes of Pseudodiploöspora longispora on Morchella based on genomic characterization and comparative genomic analysis.

  • Authors : Xie J; Department of Plant Pathology, College of Agriculture, Guizhou University, Guiyang, Guizhou, China.; Institute of Edible Mushroom, Guizhou University, Guiyang, China.

Subjects: Phylogeny* ; Genome, Fungal* ; Genomics*/Genomics*/Genomics*/methods

  • Source: Scientific reports [Sci Rep] 2024 Aug 10; Vol. 14 (1), pp. 18588. Date of Electronic Publication: 2024 Aug 10.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited

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Academic Journal

Isolation, genome analysis and tissue localization of Ceratobasidium theobromae, a new encounter pathogen of cassava in Southeast Asia.

  • Authors : Gil-Ordóñez A; Cassava Program, Crops for Nutrition and Health, International Center for Tropical Agriculture (CIAT), The Americas Hub, Km 17, Recta Cali-Palmira, 763537, Palmira, Colombia.; Departamento de Biología, Facultad de Ciencias Naturales y Exactas, Universidad del Valle, Calle 13 # 100-00, 760032, Cali, Colombia.

Subjects: Manihot*/Manihot*/Manihot*/microbiology ; Plant Diseases*/Plant Diseases*/Plant Diseases*/microbiology ; Genome, Fungal*

  • Source: Scientific reports [Sci Rep] 2024 Aug 05; Vol. 14 (1), pp. 18139. Date of Electronic Publication: 2024 Aug 05.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited

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Academic Journal

Whole genome sequencing and analysis of the weed pathogen Trichoderma polysporum HZ-31.

  • Authors : He Y; Academy of Agriculture and Forestry Sciences, Qinghai University, Xining, 810016, China.; State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining, China.

Subjects: Trichoderma*/Trichoderma*/Trichoderma*/genetics ; Whole Genome Sequencing*/Whole Genome Sequencing*/Whole Genome Sequencing*/methods ; Genome, Fungal*

  • Source: Scientific reports [Sci Rep] 2024 Jul 02; Vol. 14 (1), pp. 15228. Date of Electronic Publication: 2024 Jul 02.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited

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Academic Journal

Whole-genome sequencing of Ganoderma boninense, the causal agent of basal stem rot disease in oil palm, via combined short- and long-read sequencing.

  • Authors : Utomo C; Department of Biotechnology, PT SMART Tbk, Bogor, 16810, Indonesia. .; Tanjung ZA

Subjects: Ganoderma*/Ganoderma*/Ganoderma*/genetics ; Whole Genome Sequencing*/Whole Genome Sequencing*/Whole Genome Sequencing*/methods ; Plant Diseases*/Plant Diseases*/Plant Diseases*/microbiology Ganoderma boninense

  • Source: Scientific reports [Sci Rep] 2024 May 08; Vol. 14 (1), pp. 10520. Date of Electronic Publication: 2024 May 08.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited

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Academic Journal

High intragenomic, intergenomic, and phenotypic diversity in pulcherrimin-producing Metschnikowia yeasts indicates a special mode of genome evolution.

  • Authors : Sipiczki M; Department of Genetics and Applied Microbiology, University of Debrecen, Debrecen, Hungary. .; Czentye K

Subjects: Metschnikowia*/Metschnikowia*/Metschnikowia*/genetics ; Genome, Fungal* ; Evolution, Molecular*

  • Source: Scientific reports [Sci Rep] 2024 May 08; Vol. 14 (1), pp. 10521. Date of Electronic Publication: 2024 May 08.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited

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Academic Journal

Large-scale genomic analyses with machine learning uncover predictive patterns associated with fungal phytopathogenic lifestyles and traits.

  • Authors : Dort EN; Department of Forest and Conservation Sciences, Faculty of Forestry, University of British Columbia, Vancouver, BC, Canada.; Layne E

Subjects: Genome, Fungal*/Genome, Fungal*/Genome, Fungal*/genetics ; Ascomycota*/Ascomycota*/Ascomycota*/genetics; Humans

  • Source: Scientific reports [Sci Rep] 2023 Oct 11; Vol. 13 (1), pp. 17203. Date of Electronic Publication: 2023 Oct 11.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited

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Academic Journal

Target prediction of potential candidate miRNAs from Oryza sativa to silence the Pyricularia oryzae genome in rice blast.

  • Authors : Suddal T; Department of Biotechnology, Knowledge Unit of Science, University of Management and Technology, Sialkot Campus, Sialkot, Punjab, Pakistan.; Awan MF

Subjects: Oryza*/Oryza*/Oryza*/genetics ; Oryza*/Oryza*/Oryza*/microbiology ; MicroRNAs*/MicroRNAs*/MicroRNAs*/genetics Pyricularia oryzae

  • Source: Scientific reports [Sci Rep] 2024 Sep 18; Vol. 14 (1), pp. 21813. Date of Electronic Publication: 2024 Sep 18.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited

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Academic Journal

A user-friendly CRISPR/Cas9 system for mutagenesis of Neurospora crassa.

  • Authors : Grüttner S; Abteilung Botanische Genetik und Molekularbiologie, Botanisches Institut und Botanischer Garten, Christian-Albrechts-Universität zu Kiel, Olshausenstraße 40, 24098, Kiel, Germany. .; Kempken F

Subjects: Neurospora crassa*/Neurospora crassa*/Neurospora crassa*/genetics ; CRISPR-Cas Systems* ; Mutagenesis*

  • Source: Scientific reports [Sci Rep] 2024 Sep 03; Vol. 14 (1), pp. 20469. Date of Electronic Publication: 2024 Sep 03.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited

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Academic Journal

Metagenomic sequencing for detection and identification of the boxwood blight pathogen Calonectria pseudonaviculata.

  • Authors : Yang S; School of Plant and Environmental Sciences, Virginia Tech, Blacksburg, VA, USA.; Johnson MA

Subjects: Genome, Fungal* ; Metagenome*; Buxus/Buxus/Buxus/*microbiology Calonectria pseudonaviculata

  • Source: Scientific reports [Sci Rep] 2022 Jan 26; Vol. 12 (1), pp. 1399. Date of Electronic Publication: 2022 Jan 26.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited

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Academic Journal

Hybrid de novo genome-reassembly reveals new insights on pathways and pathogenicity determinants in rice blast pathogen Magnaporthe oryzae RMg_Dl.

  • Authors : Reddy B; Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, 110012, India.; Kumar A

Subjects: Genome, Fungal*; Ascomycota/Ascomycota/Ascomycota/*genetics ; Fungal Proteins/Fungal Proteins/Fungal Proteins/*genetics Pyricularia oryzae

  • Source: Scientific reports [Sci Rep] 2021 Nov 25; Vol. 11 (1), pp. 22922. Date of Electronic Publication: 2021 Nov 25.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited

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