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Academic Journal

Analysis of the homodimeric structure of a D-Ala-D-Ala metallopeptidase, VanX, from vancomycin-resistant bacteria.

  • Authors : Konuma T; Graduate School of Medical Life Science, Yokohama City University, Yokohama, Kanagawa, Japan.; Takai T

Subjects: Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/chemistry ; Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/metabolism ; Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/antagonists & inhibitors

  • Source: Protein science : a publication of the Protein Society [Protein Sci] 2024 Jun; Vol. 33 (6), pp. e5002.Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print

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Academic Journal

ProkDBP: Toward more precise identification of prokaryotic DNA binding proteins.

  • Authors : Pradhan UK; Division of Statistical Genetics, ICAR-Indian Agricultural Statistics Research Institute, PUSA, New Delhi, India.; Meher PK

Subjects: Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/chemistry ; Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/metabolism ; Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/genetics

  • Source: Protein science : a publication of the Protein Society [Protein Sci] 2024 Jun; Vol. 33 (6), pp. e5015.Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print

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Academic Journal

A cascade of sulfur transferases delivers sulfur to the sulfur-oxidizing heterodisulfide reductase-like complex.

  • Authors : Tanabe TS; Institut für Mikrobiologie & Biotechnologie, Rheinische Friedrich-Wilhelms-Universität Bonn, Bonn, Germany.; Division of Microbial Ecology, University of Vienna, Wien, Austria.

Subjects: Sulfur*/Sulfur*/Sulfur*/metabolism ; Oxidation-Reduction* ; Sulfurtransferases*/Sulfurtransferases*/Sulfurtransferases*/metabolism

  • Source: Protein science : a publication of the Protein Society [Protein Sci] 2024 Jun; Vol. 33 (6), pp. e5014.Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print

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Academic Journal

Improving enzyme functional annotation by integrating in vitro and in silico approaches: The example of histidinol phosphate phosphatases.

  • Authors : Kinateder T; Institute of Biophysics and Physical Biochemistry & Regensburg Center for Biochemistry, University of Regensburg, Regensburg, Germany.; Mayer C

Subjects: Histidinol-Phosphatase*/Histidinol-Phosphatase*/Histidinol-Phosphatase*/chemistry ; Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/chemistry; Amino Acid Sequence

  • Source: Protein science : a publication of the Protein Society [Protein Sci] 2024 Feb; Vol. 33 (2), pp. e4899.Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print

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Academic Journal

AlphaFold2 captures the conformational landscape of the HAMP signaling domain.

  • Authors : Winski A; Laboratory of Structural Bioinformatics, Centre of New Technologies, University of Warsaw, Warsaw, Poland.; Ludwiczak J

Subjects: Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/chemistry ; Histidine*; Molecular Conformation

  • Source: Protein science : a publication of the Protein Society [Protein Sci] 2024 Jan; Vol. 33 (1), pp. e4846.Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print

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Academic Journal

Tuning the stator subunit of the flagellar motor with coiled-coil engineering.

  • Authors : Ridone P; School of Biotechnology and Biomolecular Science, UNSW Sydney, Sydney, Australia.; Winter DL

Subjects: Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/genetics ; Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/chemistry ; Flagella*/Flagella*/Flagella*/chemistry

  • Source: Protein science : a publication of the Protein Society [Protein Sci] 2023 Dec; Vol. 32 (12), pp. e4811.Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print

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Academic Journal

Synthesis and degradation of the cyclic dinucleotide messenger c-di-AMP in the hyperthermophilic archaeon Pyrococcus yayanosii.

  • Authors : Jin Z; State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, China.; Instrumental analysis center, Shanghai Jiao Tong University, Shanghai, China.

Subjects: Archaea*/Archaea*/Archaea*/metabolism ; Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/chemistry; Bacteria/Bacteria/Bacteria/metabolism

  • Source: Protein science : a publication of the Protein Society [Protein Sci] 2023 Dec; Vol. 32 (12), pp. e4829.Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print

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Academic Journal

DUF916 and DUF3324 in the WxL protein cluster bind to WxL and link bacterial and host surfaces.

Subjects: Peptidoglycan*/Peptidoglycan*/Peptidoglycan*/metabolism ; Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/chemistry; Protein Binding

  • Source: Protein science : a publication of the Protein Society [Protein Sci] 2023 Nov; Vol. 32 (11), pp. e4806.Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print

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Academic Journal

Structural and biochemical insights into the bacteriophage PlyGRCS endolysin targeting methicillin-resistant Staphylococcus aureus (MRSA) and serendipitous discovery of its interaction with a cold shock protein C (CspC).

  • Authors : Krishnappa G; Department of Biophysics, National Institute of Mental Health and Neuro Sciences (NIMHANS), Bengaluru, India.; Mandal M

Subjects: Cold Shock Proteins and Peptides*/Cold Shock Proteins and Peptides*/Cold Shock Proteins and Peptides*/chemistry ; Endopeptidases*/Endopeptidases*/Endopeptidases*/chemistry ; Endopeptidases*/Endopeptidases*/Endopeptidases*/genetics

  • Source: Protein science : a publication of the Protein Society [Protein Sci] 2023 Sep; Vol. 32 (9), pp. e4737.Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print

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Academic Journal

Development of bright red-shifted miRFP704nano using structural analysis of miRFPnano proteins.

  • Authors : Oliinyk OS; Medicum, Faculty of Medicine, University of Helsinki, Helsinki, Finland.; Pletnev S

Subjects: Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/chemistry ; Phytochrome*/Phytochrome*/Phytochrome*/chemistry ; Phytochrome*/Phytochrome*/Phytochrome*/metabolism

  • Source: Protein science : a publication of the Protein Society [Protein Sci] 2023 Aug; Vol. 32 (8), pp. e4709.Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print

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