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  • 1-10 ل  6,200 نتائج ل ""Databases, Protein""
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Academic Journal

Multi-proteins similarity-based sampling to select representative genomes from large databases.

  • Authors : Coudert RV; Université Claude Bernard Lyon 1, LBBE, UMR 5558, CNRS, VAS, 69622, Villeurbanne, France.; Microbiology Research and Development, BioMérieux SA, 376 Chemin de L'Orme, 69280, Marcy-L'Étoile, France.

Subjects: Genome, Bacterial* ; Databases, Genetic* ; Genomics*/Genomics*/Genomics*/methods

  • Source: BMC bioinformatics [BMC Bioinformatics] 2025 May 06; Vol. 26 (1), pp. 121. Date of Electronic Publication: 2025 May 06.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Using Large Language Model to Optimize Protein Purification: Insights from Protein Structure Literature Associated with Protein Data Bank.

  • Authors : Chen Z; Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore, 117543, Singapore.; Sivaraman J

Subjects: Databases, Protein* ; Proteins*/Proteins*/Proteins*/chemistry ; Proteins*/Proteins*/Proteins*/isolation & purification

  • Source: Advanced science (Weinheim, Baden-Wurttemberg, Germany) [Adv Sci (Weinh)] 2025 Apr; Vol. 12 (15), pp. e2413689. Date of Electronic Publication: 2025 Feb 20.Publisher: WILEY-VCH Country of Publication: Germany NLM ID: 101664569 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2198-3844

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Academic Journal

Antimicrobial Peptide Databases as the Guiding Resource in New Antimicrobial Agent Identification via Computational Methods.

  • Authors : Marczak B; Faculty of Chemistry, Rzeszów University of Technology, Powstańców Warszawy 6, 35-959 Rzeszów, Poland.; Bocian A

Subjects: Antimicrobial Peptides*/Antimicrobial Peptides*/Antimicrobial Peptides*/chemistry ; Antimicrobial Peptides*/Antimicrobial Peptides*/Antimicrobial Peptides*/pharmacology ; Anti-Infective Agents*/Anti-Infective Agents*/Anti-Infective Agents*/chemistry

  • Source: Molecules (Basel, Switzerland) [Molecules] 2025 Mar 14; Vol. 30 (6). Date of Electronic Publication: 2025 Mar 14.Publisher: MDPI Country of Publication: Switzerland NLM ID: 100964009 Publication Model: Electronic Cited Medium: Internet ISSN: 1420-3049

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Academic Journal

sORFdb - a database for sORFs, small proteins, and small protein families in bacteria.

  • Authors : Hahnfeld JM; Bioinformatics and Systems Biology, Justus Liebig University Giessen, Heinrich-Buff-Ring, Giessen, 35392, Hesse, Germany. .; Schwengers O

Subjects: Databases, Protein* ; Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/genetics ; Bacterial Proteins*/Bacterial Proteins*/Bacterial Proteins*/chemistry

  • Source: BMC genomics [BMC Genomics] 2025 Feb 05; Vol. 26 (1), pp. 110. Date of Electronic Publication: 2025 Feb 05.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Academic Journal

A metric and its derived protein network for evaluation of ortholog database inconsistency.

  • Authors : Yang W; NYU-Shanghai, Shanghai, 200120, China.; Software Engineering Institute, East China Normal University, Shanghai, 200062, China.

Subjects: Databases, Protein* ; Proteins*/Proteins*/Proteins*/chemistry ; Proteins*/Proteins*/Proteins*/metabolism

  • Source: BMC bioinformatics [BMC Bioinformatics] 2025 Jan 07; Vol. 26 (1), pp. 6. Date of Electronic Publication: 2025 Jan 07.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Academic Journal

Identifying representative sequences of protein families using submodular optimization.

  • Authors : Nguyen H; Department of Computer Science and Software Engineering, Auburn University, Auburn, AL, 36849, USA.; Nguyen H

Subjects: Algorithms* ; Databases, Protein*; Computational Biology/Computational Biology/Computational Biology/methods

  • Source: Scientific reports [Sci Rep] 2025 Jan 07; Vol. 15 (1), pp. 1069. Date of Electronic Publication: 2025 Jan 07.Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

CORUM in 2024: protein complexes as drug targets.

  • Authors : Steinkamp R; Institute of Experimental Genetics, Helmholtz Zentrum München, German Research Center for Environmental Health (GmbH), Ingolstädter Landstr. 1, Neuherberg D-85764, Germany.; Tsitsiridis G

Subjects: Databases, Protein*; Humans ; Multiprotein Complexes/Multiprotein Complexes/Multiprotein Complexes/metabolism

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 06; Vol. 53 (D1), pp. D651-D657.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

TCR3d 2.0: expanding the T cell receptor structure database with new structures, tools and interactions.

  • Authors : Lin V; Department of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA.; University of Maryland Institute for Bioscience and Biotechnology Research, Rockville, MD 20850, USA.

Subjects: Receptors, Antigen, T-Cell*/Receptors, Antigen, T-Cell*/Receptors, Antigen, T-Cell*/chemistry ; Receptors, Antigen, T-Cell*/Receptors, Antigen, T-Cell*/Receptors, Antigen, T-Cell*/immunology ; Receptors, Antigen, T-Cell*/Receptors, Antigen, T-Cell*/Receptors, Antigen, T-Cell*/metabolism

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 06; Vol. 53 (D1), pp. D604-D608.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

SYNBIP 2.0: epitopes mapping, sequence expansion and scaffolds discovery for synthetic binding protein innovation.

  • Authors : Li Y; Chongqing Key Laboratory of Natural Product Synthesis and Drug Research, School of Pharmaceutical Sciences, Chongqing University, No. 55 South University Town Road, High-tech Zone, Chongqing 401331, China.; Li F

Subjects: Databases, Protein* ; Epitope Mapping*/Epitope Mapping*/Epitope Mapping*/methods; Models, Molecular

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 06; Vol. 53 (D1), pp. D595-D603.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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Academic Journal

InterPro: the protein sequence classification resource in 2025.

  • Authors : Blum M; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton CB10 1SD, UK.; Andreeva A

Subjects: Databases, Protein* ; Software* ; Sequence Analysis, Protein*

  • Source: Nucleic acids research [Nucleic Acids Res] 2025 Jan 06; Vol. 53 (D1), pp. D444-D456.Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN:

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  • 1-10 ل  6,200 نتائج ل ""Databases, Protein""