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EmbedCaps-DBP: Predicting DNA-Binding Proteins Using Protein Sequence Embedding and Capsule Network

• Authors : Muhammad Khaerul Naim; Tati Rajab Mengko; Rukman Hertadi

Subjects: Capsule network; DNA-binding proteins; deep learning

• Source: IEEE Access, Vol 11, Pp 121256-121268 (2023)

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A bacterial expression cloning screen reveals single-stranded DNA-binding proteins as potent desicco-protectants

• Authors : Jonathan D. Hibshman; Courtney M. Clark-Hachtel; Kerry S. Bloom

Subjects: CP: Cell biology; Biology (General); QH301-705.5

• Source: Cell Reports, Vol 43, Iss 11, Pp 114956- (2024)

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Protocol to identify DNA-binding proteins recognizing nucleotide repeat dsDNAs

• Authors : Zhiyuan Huang; Yixin Zhou; Yang Liu

Subjects: Cell Biology; Cell culture; Cell-based Assays

• Source: STAR Protocols, Vol 5, Iss 2, Pp 103013- (2024)

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An Efficient Deep Learning Approach for DNA-Binding Proteins Classification from Primary Sequences

• Authors : Nosiba Yousif Ahmed; Wafa Alameen Alsanousi; Eman Mohammed Hamid

Subjects: Deep learning; Convolutional neural network; Gated recurrent unit

• Source: International Journal of Computational Intelligence Systems, Vol 17, Iss 1, Pp 1-14 (2024)

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DNA-Binding Proteins and Passenger Proteins in Plasma DNA–Protein Complexes: Imprint of Parental Cells or Key Mediators of Carcinogenesis Processes?

• Authors : Oleg Tutanov; Aleksei Shefer; Evgenii Shefer

Subjects: plasma DNA; nucleoprotein complexes; MALDI-TOF mass spectrometry

• Source: International Journal of Molecular Sciences, Vol 25, Iss 10, p 5165 (2024)

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Single-Stranded DNA-Binding Proteins in the Archaea

• Authors : Taib, Najwa; Gribaldo, Simonetta; Macneill, Stuart ...

Subjects: Phylogenetics; RPA; Replication protein A

• Source: Single Stranded DNA Binding Proteins ; https://pasteur.hal.science/pasteur-03682183 ; Single Stranded

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Deep-WET: a deep learning-based approach for predicting DNA-binding proteins using word embedding techniques with weighted features

• Authors : S. M. Hasan Mahmud; Kah Ong Michael Goh; Md. Faruk Hosen

Subjects: Medicine; Science

• Source: Scientific Reports, Vol 14, Iss 1, Pp 1-17 (2024)

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The effect of DNA-binding proteins on insertion sequence element transposition upstream of the bgl operon in Escherichia coli

• Authors : Peter W. Kopkowski; Zhongge Zhang; Milton H. Saier

Subjects: IS element; insertional mutation; adaptive mutation

• Source: Frontiers in Microbiology, Vol 15 (2024)

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Scanning Electron Microscopy Imaging of Large DNA Molecules Using a Metal‐Free Electro‐Stain Composed of DNA‐Binding Proteins and Synthetic Polymers

• Authors : Chanyoung Noh; Yoonjung Kang; Sujung Heo

Subjects: DNA binding protein; polyvinylpyrrolidone; quantum dot labeling

• Source: Advanced Science, Vol 11, Iss 28, Pp n/a-n/a (2024)

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Scanning Electron Microscopy Imaging of Large DNA Molecules Using a Metal‐Free Electro‐Stain Composed of DNA‐Binding Proteins and Synthetic Polymers

• Authors : Noh, Chanyoung; Kang, Yoonjung; Heo, Sujung ...

• Source: Advanced Science ; volume 11, issue 28 ; ISSN 2198-3844 2198-3844

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