نتائج البحث

Sequence-based prediction of protein binding mode landscapes.

• Authors : Horvath, Attila^1,2 (AUTHOR); Miskei, Marton¹ (AUTHOR); Ambrus, Viktor¹ (AUTHOR)

• Source: PLoS Computational Biology. 5/26/2020, Vol. 16 Issue 5, p1-19. 19p. 6 Graphs.

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Effect of Ca2+ on the promiscuous target-protein binding of calmodulin.

• Authors : Westerlund, Annie M.¹; Delemotte, Lucie¹

• Source: PLoS Computational Biology. 4/3/2018, Vol. 14 Issue 4, p1-27. 27p. 2 Diagrams, 5 Charts, 8 Graphs.

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Energy landscapes of peptide-MHC binding.

• Authors : Collesano L; Institute for Biological Physics, University of Cologne, Cologne, Germany.; Łuksza M

Subjects: Peptides*/Peptides*/Peptides*/chemistry ; Peptides*/Peptides*/Peptides*/metabolism ; Peptides*/Peptides*/Peptides*/immunology

• Source: PLoS computational biology [PLoS Comput Biol] 2024 Sep 03; Vol. 20 (9), pp. e1012380. Date of Electronic Publication: 2024 Sep 03 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Molecular dynamics simulations reveal how vinculin refolds partially unfolded talin rod helices to stabilize them against mechanical force.

• Authors : Mykuliak VV; Faculty of Medicine and Health Technology, Tampere University, Tampere, Finland.; Rahikainen R

Subjects: Vinculin*/Vinculin*/Vinculin*/metabolism ; Vinculin*/Vinculin*/Vinculin*/chemistry ; Talin*/Talin*/Talin*/metabolism

• Source: PLoS computational biology [PLoS Comput Biol] 2024 Aug 07; Vol. 20 (8), pp. e1012341. Date of Electronic Publication: 2024 Aug 07 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Elucidating the complex membrane binding of a protein with multiple anchoring domains using extHMMM.

• Authors : Madsen JJ; Department of Molecular Medicine, Morsani College of Medicine, University of South Florida, Tampa, Florida, United States of America.; Center for Global Health and Infectious Diseases Research, Global and Planetary Health, College of Public Health, University of South Florida, Tampa, Florida, United States of America.

Subjects: Molecular Dynamics Simulation* ; Protein Binding*; Protein Domains

• Source: PLoS computational biology [PLoS Comput Biol] 2024 Jul 08; Vol. 20 (7), pp. e1011421. Date of Electronic Publication: 2024 Jul 08 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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RNANetMotif: Identifying sequence-structure RNA network motifs in RNA-protein binding sites.

• Authors : Ma H; Research Center for Mathematics and Interdisciplinary Sciences, Shandong University, Qingdao, China.; Terrence Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, Ontario, Canada.

Subjects: RNA*/RNA*/RNA*/genetics ; RNA-Binding Proteins*/RNA-Binding Proteins*/RNA-Binding Proteins*/metabolism; Binding Sites

• Source: PLoS computational biology [PLoS Comput Biol] 2022 Jul 12; Vol. 18 (7), pp. e1010293. Date of Electronic Publication: 2022 Jul 12 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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The overlap of small molecule and protein binding sites within families of protein structures.

• Authors : Davis, Fred P; Sali, Andrej

Subjects: Proteins; Ligands; Statistics

• Source: PLoS computational biology. 6(2)

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Nonconsensus Protein Binding to Repetitive DNA Sequence Elements Significantly Affects Eukaryotic Genomes.

• Authors : Afek, Ariel¹; Cohen, Hila¹; Barber-Zucker, Shiran¹

• Source: PLoS Computational Biology. 8/18/2015, Vol. 11 Issue 8, p1-19. 19p. 1 Diagram, 3 Graphs.

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Competition between physical search and a weak-to-strong transition rate-limits kinesin binding times.

• Authors : Nguyen T; Center for Complex Biological Systems, University of California, Irvine, Irvine, California, United States of America.; Narayanareddy BRJ

Subjects: Kinesins*/Kinesins*/Kinesins*/metabolism ; Kinesins*/Kinesins*/Kinesins*/chemistry ; Protein Binding*

• Source: PLoS computational biology [PLoS Comput Biol] 2024 May 20; Vol. 20 (5), pp. e1012158. Date of Electronic Publication: 2024 May 20 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Deep geometric representations for modeling effects of mutations on protein-protein binding affinity.

• Authors : Liu, Xianggen^1,2,3 (AUTHOR); Luo, Yunan⁴ (AUTHOR); Li, Pengyong^1,3 (AUTHOR)

• Source: PLoS Computational Biology. 8/4/2021, Vol. 17 Issue 8, p1-28. 28p. 4 Diagrams, 3 Charts, 1 Graph.

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