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  • 1-10 ل  130 نتائج ل ""Molecular Sequence Annotation""

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Publication : plos computational biology
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Academic Journal

scTrans: Sparse attention powers fast and accurate cell type annotation in single-cell RNA-seq data.

  • Authors : Zou Z; College of Computer Science and Electronic Engineering, Hunan University, Changsha, Hunan, China.; Liu Y

Subjects: Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods ; Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/statistics & numerical data ; RNA-Seq*/RNA-Seq*/RNA-Seq*/methods

  • Source: PLoS computational biology [PLoS Comput Biol] 2025 Apr 04; Vol. 21 (4), pp. e1012904. Date of Electronic Publication: 2025 Apr 04 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Structure-aware annotation of leucine-rich repeat domains.

  • Authors : Xu B; Center for Computational Biology, University of California Berkeley, Berkeley, California, United States of America.; Department of Mathematics, University of California Berkeley, Berkeley, California, United States of America.

Subjects: Arabidopsis*/Arabidopsis*/Arabidopsis*/genetics ; Arabidopsis*/Arabidopsis*/Arabidopsis*/chemistry ; Computational Biology*/Computational Biology*/Computational Biology*/methods

  • Source: PLoS computational biology [PLoS Comput Biol] 2024 Nov 05; Vol. 20 (11), pp. e1012526. Date of Electronic Publication: 2024 Nov 05 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

NAVIP: Unraveling the influence of neighboring small sequence variants on functional impact prediction.

  • Authors : Baasner JS; Genetics and Genomics of Plants, Faculty of Biology & Center for Biotechnology, Bielefeld University, Bielefeld, Germany.; Rempel A

Subjects: Software* ; Computational Biology*/Computational Biology*/Computational Biology*/methods ; Genetic Variation*/Genetic Variation*/Genetic Variation*/genetics

  • Source: PLoS computational biology [PLoS Comput Biol] 2025 Feb 18; Vol. 21 (2), pp. e1012732. Date of Electronic Publication: 2025 Feb 18 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Report

Ten simple rules for annotating sequencing experiments.

  • Authors : Stevens I; Department of Biosciences and Nutrition, Karolinska Institutet, Huddinge, Sweden.; Science for Life Laboratory, Karolinska Institutet, Stockholm, Sweden.

Subjects: Genomics*/Genomics*/Genomics*/methods ; Genomics*/Genomics*/Genomics*/standards ; Molecular Sequence Annotation*/Molecular Sequence Annotation*/Molecular Sequence Annotation*/methods

  • Source: PLoS computational biology [PLoS Comput Biol] 2020 Oct 05; Vol. 16 (10), pp. e1008260. Date of Electronic Publication: 2020 Oct 05 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Bayesian parameter estimation for automatic annotation of gene functions using observational data and phylogenetic trees.

  • Authors : Vega Yon GG; Division of Biostatistics, Department of Preventive Medicine, University of Southern California, Los Angeles, California, United States of America.; Thomas DC

Subjects: Models, Genetic* ; Phylogeny*; Molecular Sequence Annotation/Molecular Sequence Annotation/Molecular Sequence Annotation/*methods

  • Source: PLoS computational biology [PLoS Comput Biol] 2021 Feb 18; Vol. 17 (2), pp. e1007948. Date of Electronic Publication: 2021 Feb 18 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Classification and phylogeny for the annotation of novel eukaryotic GNAT acetyltransferases.

  • Authors : Krtenic B; Department of Biological Sciences, University of Bergen, Norway.; Computational Biology Unit, Department of Informatics, University of Bergen, Norway.

Subjects: Molecular Sequence Annotation* ; Phylogeny*; Acetyltransferases/Acetyltransferases/Acetyltransferases/*classification

  • Source: PLoS computational biology [PLoS Comput Biol] 2020 Dec 23; Vol. 16 (12), pp. e1007988. Date of Electronic Publication: 2020 Dec 23 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Twelve quick steps for genome assembly and annotation in the classroom.

  • Authors : Jung H; School of Biological Sciences, The University of Queensland, St Lucia, Queensland, Australia.; Centre for Agriculture and Bioeconomy, Queensland University of Technology, Brisbane, Queensland, Australia.

Subjects: Genome*; Genomics/Genomics/Genomics/*methods ; Molecular Sequence Annotation/Molecular Sequence Annotation/Molecular Sequence Annotation/*methods

  • Source: PLoS computational biology [PLoS Comput Biol] 2020 Nov 12; Vol. 16 (11), pp. e1008325. Date of Electronic Publication: 2020 Nov 12 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Galaxy and Apollo as a biologist-friendly interface for high-quality cooperative phage genome annotation.

  • Authors : Ramsey J; Center for Phage Technology, Texas A&M University, College Station, Texas, United States of America.; Department of Biochemistry and Biophysics, Texas A&M University, College Station, Texas, United States of America.

Subjects: Genome, Viral* ; Molecular Sequence Annotation* ; User-Computer Interface*

  • Source: PLoS computational biology [PLoS Comput Biol] 2020 Nov 02; Vol. 16 (11), pp. e1008214. Date of Electronic Publication: 2020 Nov 02 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

Leveraging functional annotation to identify genes associated with complex diseases.

  • Authors : Liu W; Program of Computational Biology and Bioinformatics, Yale University, New Haven, CT, United States of America.; Li M

Subjects: Genetic Predisposition to Disease* ; Molecular Sequence Annotation*; Epigenesis, Genetic

  • Source: PLoS computational biology [PLoS Comput Biol] 2020 Nov 02; Vol. 16 (11), pp. e1008315. Date of Electronic Publication: 2020 Nov 02 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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Academic Journal

G-OnRamp: Generating genome browsers to facilitate undergraduate-driven collaborative genome annotation.

  • Authors : Sargent L; Department of Biomedical Engineering, Oregon Health & Science University, Portland, Oregon, United States of America.; Liu Y

Subjects: Genome* ; Molecular Sequence Annotation* ; Software*

  • Source: PLoS computational biology [PLoS Comput Biol] 2020 Jun 04; Vol. 16 (6), pp. e1007863. Date of Electronic Publication: 2020 Jun 04 (Print Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet

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  • 1-10 ل  130 نتائج ل ""Molecular Sequence Annotation""