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Persistence and plasticity in bacterial gene regulation

• Authors : Baumgart, Leo A; Lee, Ji Eun; Salamov, Asaf

Subjects: Biochemistry and Cell Biology; Bioinformatics and Computational Biology; Genetics

• Source: Nature Methods. 18(12)

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Wisdom of crowds for robust gene network inference.

• Authors : Marbach, Daniel^1,2; Costello, James C^3,4; Küffner, Robert^5,6

• Source: Nature Methods. Aug2012, Vol. 9 Issue 8, p796-804. 9p.

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Characterizing bacterial gene circuit dynamics with optically programmed gene expression signals.

• Authors : Olson, Evan J¹; Hartsough, Lucas A²; Landry, Brian P²

• Source: Nature Methods. Apr2014, Vol. 11 Issue 4, p449-455. 7p.

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Pathway and network analysis of cancer genomes.

• Authors : Creixell P; Reimand J ...

Subjects: Gene Regulatory Networks* ; Genome*; Neoplasms/Neoplasms/Neoplasms/*genetics

• Source: Nature methods [Nat Methods] 2015 Jul; Vol. 12 (7), pp. 615-621.Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print Cited Medium: Internet ISSN:

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A quantitative framework for the forward design of synthetic miRNA circuits.

• Authors : Bloom RJ; Department of Bioengineering, Stanford University, Stanford, California, USA.; Winkler SM

Subjects: Gene Regulatory Networks* ; Genetic Engineering* ; RNA Interference*

• Source: Nature methods [Nat Methods] 2014 Nov; Vol. 11 (11), pp. 1147-53. Date of Electronic Publication: 2014 Sep 14.Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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A general design strategy for protein-responsive riboswitches in mammalian cells.

• Authors : Ausländer S; Department of Biosystems Science and Engineering, ETH Zurich, Basel, Switzerland.; Stücheli P

Subjects: Gene Regulatory Networks* ; Protein Biosynthesis* ; Riboswitch*

• Source: Nature methods [Nat Methods] 2014 Nov; Vol. 11 (11), pp. 1154-60. Date of Electronic Publication: 2014 Oct 05.Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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Expanding the synthetic ribonucleoprotein world in cells.

• Authors : Endo K; Department of Reprogramming Science, Center for iPS Cell Research and Application, Kyoto University, Kyoto, Japan.; Parr C

Subjects: Gene Regulatory Networks* ; Protein Biosynthesis* ; Riboswitch*

• Source: Nature methods [Nat Methods] 2014 Nov; Vol. 11 (11), pp. 1105-6.Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print Cited Medium: Internet ISSN:

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Principles of genetic circuit design.

• Authors : Brophy JA; Synthetic Biology Center, Department of Biological Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.; Voigt CA

Subjects: Gene Regulatory Networks*; Genetic Engineering/Genetic Engineering/Genetic Engineering/*methods ; Synthetic Biology/Synthetic Biology/Synthetic Biology/*methods

• Source: Nature methods [Nat Methods] 2014 May; Vol. 11 (5), pp. 508-20.Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print Cited Medium: Internet ISSN:

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Similarity network fusion for aggregating data types on a genomic scale.

• Authors : Wang B; 1] Genetics and Genome Biology, SickKids Research Institute, Toronto, Ontario, Canada. [2].; Mezlini AM

Subjects: Gene Regulatory Networks* ; Genomics*; Computational Biology/Computational Biology/Computational Biology/*methods

• Source: Nature methods [Nat Methods] 2014 Mar; Vol. 11 (3), pp. 333-7. Date of Electronic Publication: 2014 Jan 26.Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN:

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The genome shows its sensitive side.

• Authors : Raj A; Department of Genetics, Stanford University, Stanford, California, USA.; McVicker G

Subjects: Epigenomics* ; Gene Regulatory Networks*; DNA-Binding Proteins/DNA-Binding Proteins/DNA-Binding Proteins/*chemistry

• Source: Nature methods [Nat Methods] 2014 Jan; Vol. 11 (1), pp. 39-40.Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print Cited Medium: Internet ISSN:

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