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  • 1-10 ل  10 نتائج ل ""single-cell gene expression analysis""

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Publication : communications biology
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Academic Journal

Integrating large-scale single-cell RNA sequencing in central nervous system disease using self-supervised contrastive learning.

  • Authors : Fang Y; Department of Neurosurgery, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.; Chen J

Subjects: Central Nervous System*/Central Nervous System*/Central Nervous System*/cytology ; Single-Cell Gene Expression Analysis* ; Supervised Machine Learning*

  • Source: Communications biology [Commun Biol] 2024 Sep 10; Vol. 7 (1), pp. 1107. Date of Electronic Publication: 2024 Sep 10.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

RENGE infers gene regulatory networks using time-series single-cell RNA-seq data with CRISPR perturbations.

  • Authors : Ishikawa M; Institute for Life and Medical Sciences, Kyoto University, Kyoto, 606-8507, Japan. .; Sugino S

Subjects: Gene Regulatory Networks* ; Single-Cell Gene Expression Analysis*; Humans

  • Source: Communications biology [Commun Biol] 2023 Dec 28; Vol. 6 (1), pp. 1290. Date of Electronic Publication: 2023 Dec 28.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

scPML: pathway-based multi-view learning for cell type annotation from single-cell RNA-seq data.

  • Authors : Du ZH; College of Computer Science and Software Engineering, ShenZhen University, 3688 Nanhai Avenue, Shenzhen, China.; Hu WL

Subjects: Single-Cell Gene Expression Analysis* ; Medicine*; Signal Transduction

  • Source: Communications biology [Commun Biol] 2023 Dec 14; Vol. 6 (1), pp. 1268. Date of Electronic Publication: 2023 Dec 14.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

TimeTalk uses single-cell RNA-seq datasets to decipher cell-cell communication during early embryo development.

  • Authors : Wang L; Peking University-Tsinghua University-National Institute of Biological Sciences Joint Graduate Program, School of Life Sciences, Peking University, Beijing, 100871, China.; Center for Bioinformatics, School of Life Sciences, Center for Statistical Science, Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, 100871, China.

Subjects: Single-Cell Gene Expression Analysis* ; Cell Communication*/Cell Communication*/Cell Communication*/genetics; Female

  • Source: Communications biology [Commun Biol] 2023 Sep 02; Vol. 6 (1), pp. 901. Date of Electronic Publication: 2023 Sep 02.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Structure-preserving visualization for single-cell RNA-Seq profiles using deep manifold transformation with batch-correction.

  • Authors : Xu Y; Zhejiang University, Hangzhou, 310058, China.; AI Division, School of Engineering, Westlake University, Hangzhou, 310024, China.

Subjects: Single-Cell Gene Expression Analysis* ; Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods; Animals

  • Source: Communications biology [Commun Biol] 2023 Apr 04; Vol. 6 (1), pp. 369. Date of Electronic Publication: 2023 Apr 04.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Domain adaptation for supervised integration of scRNA-seq data.

  • Authors : Sun Y; School of Electrical and Computer Engineering, Georgia Institute of Technology, Atlanta, Georgia, USA.; Qiu P

Subjects: Single-Cell Gene Expression Analysis* ; Single-Cell Analysis*; Sequence Analysis, RNA

  • Source: Communications biology [Commun Biol] 2023 Mar 16; Vol. 6 (1), pp. 274. Date of Electronic Publication: 2023 Mar 16.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

starTracer is an accelerated approach for precise marker gene identification in single-cell RNA-Seq analysis.

  • Authors : Zhang F; Brain Research Center, Zhongnan Hospital, Second Clinical School, Wuhan University, Wuhan, China.; Graduate School of Biostudies, Kyoto University, Kyoto, Japan.

Subjects: Single-Cell Analysis*/Single-Cell Analysis*/Single-Cell Analysis*/methods ; Algorithms* ; RNA-Seq*/RNA-Seq*/RNA-Seq*/methods

  • Source: Communications biology [Commun Biol] 2024 Sep 13; Vol. 7 (1), pp. 1128. Date of Electronic Publication: 2024 Sep 13.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Integrative analysis of single-cell RNA-seq and gut microbiome metabarcoding data elucidates macrophage dysfunction in mice with DSS-induced ulcerative colitis.

  • Authors : Hong D; RNA Cell Biology Laboratory, Graduate Department of Bioconvergence Engineering, Dankook University, Yongin, Republic of Korea.; Kim HK

Subjects: Colitis, Ulcerative*/Colitis, Ulcerative*/Colitis, Ulcerative*/chemically induced ; Colitis, Ulcerative*/Colitis, Ulcerative*/Colitis, Ulcerative*/microbiology ; Gastrointestinal Microbiome*

  • Source: Communications biology [Commun Biol] 2024 Jun 15; Vol. 7 (1), pp. 731. Date of Electronic Publication: 2024 Jun 15.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Single-cell transcriptome analysis of epithelial, immune, and stromal signatures and interactions in human ovarian cancer.

  • Authors : Chai C; College of Life Sciences, University of Chinese Academy of Sciences, Beijing, 10049, China.; Lars Bolund Institute of Regenerative Medicine Qingdao-Europe Advanced Institute for LifeScience, BGI Research, Qingdao, 266555, China.

Subjects: Cancer-Associated Fibroblasts*/Cancer-Associated Fibroblasts*/Cancer-Associated Fibroblasts*/metabolism ; Ovarian Neoplasms*/Ovarian Neoplasms*/Ovarian Neoplasms*/pathology; Humans

  • Source: Communications biology [Commun Biol] 2024 Jan 26; Vol. 7 (1), pp. 131. Date of Electronic Publication: 2024 Jan 26.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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Academic Journal

Integration of epigenetic and genetic profiles identifies multiple sclerosis disease-critical cell types and genes.

  • Authors : Ma Q; Weill Institute for Neurosciences, Department of Neurology, University of California San Francisco, San Francisco, CA, 94158, USA.; Shams H

Subjects: B-Lymphocytes*/B-Lymphocytes*/B-Lymphocytes*/metabolism ; Microglia*/Microglia*/Microglia*/metabolism ; Monocytes*/Monocytes*/Monocytes*/metabolism

  • Source: Communications biology [Commun Biol] 2023 Mar 30; Vol. 6 (1), pp. 342. Date of Electronic Publication: 2023 Mar 30.Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN:

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  • 1-10 ل  10 نتائج ل ""single-cell gene expression analysis""