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ProtGraph: a tool for the quick and comprehensive exploration and exploitation of the peptide search space derived from protein sequence databases using graphs

• Authors : Dominik Lux; Katrin Marcus-Alic; Martin Eisenacher

Subjects: Problem Solving Protocol

• Source: Brief Bioinform

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Biological sequence databases

• Authors : Lisa J. Mullan

Subjects: 0303 health sciences; 03 medical and health sciences; Databases, Genetic

• Source: Briefings in Bioinformatics. 4:75-77

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Biological sequence databases.

• Authors : Mullan, Lisa J.

Subjects: DATABASES; BIOINFORMATICS

• Source: Briefings in Bioinformatics; Mar2003, Vol. 4 Issue 1, p75, 3p

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Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion.

• Authors : Yuan, Qianmu¹ (AUTHOR); Xie, Junjie¹ (AUTHOR); Xie, Jiancong¹ (AUTHOR)

• Source: Briefings in Bioinformatics. May2023, Vol. 24 Issue 3, p1-11. 11p.

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Toward completion of the Earth's proteome: an update a decade later.

• Authors : Mier, Pablo¹ (AUTHOR) ; Andrade-Navarro, Miguel A¹ (AUTHOR)

• Source: Briefings in Bioinformatics. Mar2019, Vol. 20 Issue 2, p463-470. 8p.

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BioAutoML: automated feature engineering and metalearning to predict noncoding RNAs in bacteria.

• Authors : Bonidia, Robson P¹ (AUTHOR) ; Santos, Anderson P Avila^1,2 (AUTHOR); Almeida, Breno L S de¹ (AUTHOR)

• Source: Briefings in Bioinformatics. Jul2022, Vol. 23 Issue 4, p1-13. 13p.

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Accurate protein function prediction via graph attention networks with predicted structure information.

• Authors : Lai, Boqiao¹ (AUTHOR); Xu, Jinbo¹ (AUTHOR)

• Source: Briefings in Bioinformatics. Jan2022, Vol. 23 Issue 1, p1-9. 9p.

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Proteoform characterization based on top-down mass spectrometry.

• Authors : Zhong, Jiancheng¹ (AUTHOR); Sun, Yusui¹ (AUTHOR); Xie, Minzhu¹ (AUTHOR)

• Source: Briefings in Bioinformatics. Mar2021, Vol. 22 Issue 2, p1729-1750. 22p.

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A brief history of bioinformatics.

• Authors : Gauthier, Jeff¹ (AUTHOR) ; Vincent, Antony T² (AUTHOR); Charette, Steve J^3,4 (AUTHOR)

• Source: Briefings in Bioinformatics. Nov2019, Vol. 20 Issue 6, p1981-1996. 16p.

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NCBI-compliant genome submissions: tips and tricks to save time and money.

• Authors : Pirovano, Walter¹; Boetzer, Marten²; Derks, Martijn F. L.³

• Source: Briefings in Bioinformatics. Mar2017, Vol. 18 Issue 2, p179-182. 4p.

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