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Publication : bmc genomics Subject : computational biology Subject : gene expression profiling
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Quantitative multiplex detection of plant pathogens using a novel ligation probe-based system coupled with universal, high-throughput real-time PCR on OpenArraysTM

Subjects: Streptavidin; SDG 16 - Peace; lcsh:QH426-470

  • Source: BMC Genomics 8 (2007)BMC Genomics, 8van Doorn, R, Szemes, M, Bonants, P, Kowalchuk, G A, Sallas, J, Ortenberg, E & Schoen, C D

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UASIS: Universal Automatic SNP Identification System

Subjects: dbSNP; Standardization; lcsh:QH426-470

  • Source: BMC Genomics, Vol 12, Iss Suppl 3, p S9 (2011)BMC Genomics

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Academic Journal

OffScan: a universal and fast CRISPR off-target sites detection tool.

  • Authors : Cui Y; School of Computer, National University of Defense Technology, Changsha,, 410073, China.; Liao X

Subjects: CRISPR-Cas Systems*; Computational Biology/Computational Biology/Computational Biology/*methods ; Gene Editing/Gene Editing/Gene Editing/*methods

  • Source: BMC genomics [BMC Genomics] 2020 Mar 05; Vol. 21 (Suppl 1), pp. 872. Date of Electronic Publication: 2020 Mar 05.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Academic Journal

3' tag digital gene expression profiling of human brain and universal reference RNA using Illumina Genome Analyzer.

  • Authors : Asmann YW; Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, Rochester, MN 55905, USA.; Klee EW

Subjects: Brain/Brain/Brain/*metabolism ; Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/*methods ; Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/*standards

  • Source: BMC genomics [BMC Genomics] 2009 Nov 16; Vol. 10, pp. 531. Date of Electronic Publication: 2009 Nov 16.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Academic Journal

A universal reference sample derived from clone vector for improved detection of differential gene expression.

  • Authors : Khan RL; Daniel Baugh Institute for Functional Genomics/Computational Biology, Department of Pathology, Anatomy and Cell Biology, Thomas Jefferson University, Philadelphia, Pennsylvania 19107, USA. ; Gonye GE

Subjects: Genetic Vectors*; Gene Expression Profiling/Gene Expression Profiling/Gene Expression Profiling/*standards ; Oligonucleotide Array Sequence Analysis/Oligonucleotide Array Sequence Analysis/Oligonucleotide Array Sequence Analysis/*standards

  • Source: BMC genomics [BMC Genomics] 2006 May 05; Vol. 7, pp. 109. Date of Electronic Publication: 2006 May 05.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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SNPs selection using support vector regression and genetic algorithms in GWAS

Subjects: Genetic Markers; Male; wrapper

  • Source: BMC Genomics

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Academic Journal

ALFA: annotation landscape for aligned reads.

  • Authors : Bahin M; Computational Biology and Bioinformatics group,, Institut de biologie de l'ENS (IBENS), Département de biologie, École normale supérieure, CNRS, INSERM, PSL University, 75005, Paris, France.; Noël BF

Subjects: Arabidopsis/Arabidopsis/Arabidopsis/*genetics ; Caenorhabditis elegans/Caenorhabditis elegans/Caenorhabditis elegans/*genetics ; Computational Biology/Computational Biology/Computational Biology/*methods

  • Source: BMC genomics [BMC Genomics] 2019 Mar 29; Vol. 20 (1), pp. 250. Date of Electronic Publication: 2019 Mar 29.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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Comparative genomics and transcriptomics analysis reveals evolution patterns of selection in the Salix phylogeny

Subjects: 0106 biological sciences; lcsh:QH426-470; media_common.quotation_subject

  • Source: BMC Genomics, Vol 20, Iss 1, Pp 1-11 (2019)BMC Genomics

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A systemic approach to screening high-throughput RT-qPCR data for a suitable set of reference circulating miRNAs

Subjects: Circulating mirnas; lcsh:QH426-470; lcsh:Biotechnology

  • Source: BMC GenomicsBMC Genomics, Vol 21, Iss 1, Pp 1-15 (2020)

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Academic Journal

Application of the 3' mRNA-Seq using unique molecular identifiers in highly degraded RNA derived from formalin-fixed, paraffin-embedded tissue.

  • Authors : Jang JS; Genome Analysis Core, Medical Genome Facility, Center for Individualized Medicine, Mayo Clinic, Stabile Research Building, 200 First Street SW, Rochester, MN, 55905, USA. .; Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA. .

Subjects: Gene Expression Profiling* ; RNA*; Formaldehyde

  • Source: BMC genomics [BMC Genomics] 2021 Oct 24; Vol. 22 (1), pp. 759. Date of Electronic Publication: 2021 Oct 24.Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164

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