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Academic Journal

The golden genome annotation of Ganoderma lingzhi reveals a more complex scenario of eukaryotic gene structure and transcription activity.

  • Authors : Wang L; Guangdong Engineering Laboratory of Biomass Value-added Utilization, Guangdong Engineering Research & Development Center for Comprehensive Utilization of Plant Fiber, Guangzhou Key Laboratory for Comprehensive Utilization of Plant Fiber, Institute of Biological and Medical Engineering, Guangdong Academy of Sciences, Guangzhou, 510316, China.; Shi P

Subjects: Genome, Fungal* ; Transcription, Genetic* ; Molecular Sequence Annotation*

  • Source: BMC biology [BMC Biol] 2024 Nov 25; Vol. 22 (1), pp. 271. Date of Electronic Publication: 2024 Nov 25.Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007

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Editorial & Opinion

Dimensions of genome dynamics in fungal pathogens: from fundamentals to applications.

  • Authors : Croll D; Laboratory of Evolutionary Genetics, Institute of Biology, University of Neuchatel, Rue Emile-Argand 11, CH-2000, Neuchâtel, Switzerland. .

Subjects: Genome, Fungal* ; Fungi*/Fungi*/Fungi*/genetics ; Fungi*/Fungi*/Fungi*/pathogenicity

  • Source: BMC biology [BMC Biol] 2024 Jan 26; Vol. 22 (1), pp. 19. Date of Electronic Publication: 2024 Jan 26.Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007

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Academic Journal

Discordant evolution of mitochondrial and nuclear yeast genomes at population level.

Subjects: Evolution, Molecular* ; Genetic Variation* ; Genome, Fungal*

  • Source: BMC biology [BMC Biol] 2020 May 11; Vol. 18 (1), pp. 49. Date of Electronic Publication: 2020 May 11.Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007

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Academic Journal

A 19-isolate reference-quality global pangenome for the fungal wheat pathogen Zymoseptoria tritici.

  • Authors : Badet T; Laboratory of Evolutionary Genetics, Institute of Biology, University of Neuchâtel, Neuchâtel, Switzerland.; Oggenfuss U

Subjects: DNA Transposable Elements* ; Genome, Fungal* ; Transcriptome*

  • Source: BMC biology [BMC Biol] 2020 Feb 11; Vol. 18 (1), pp. 12. Date of Electronic Publication: 2020 Feb 11.Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007

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Academic Journal

Extensive remodeling of sugar metabolism through gene loss and horizontal gene transfer in a eukaryotic lineage.

  • Authors : Pontes A; UCIBIO, Department of Life Sciences, NOVA School of Science and Technology, Universidade NOVA de Lisboa, Caparica, Portugal.; Associate Laboratory i4HB, NOVA School of Science and Technology, Universidade NOVA de Lisboa, Caparica, Portugal.

Subjects: Gene Transfer, Horizontal*; Phylogeny ; Carbohydrate Metabolism/Carbohydrate Metabolism/Carbohydrate Metabolism/genetics

  • Source: BMC biology [BMC Biol] 2024 May 30; Vol. 22 (1), pp. 128. Date of Electronic Publication: 2024 May 30.Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007

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Academic Journal

Genome sequencing of evolved aspergilli populations reveals robust genomes, transversions in A. flavus, and sexual aberrancy in non-homologous end-joining mutants.

  • Authors : Álvarez-Escribano I; Department of Genetics, Faculty of Biology, University of Seville, Seville, Spain.; Present Address: Instituto de Bioquímica Vegetal y Fotosíntesis, Consejo Superior de Investigaciones Científicas y Universidad de Sevilla, Seville, Spain.

Subjects: Genome, Fungal* ; Mutation*; Aspergillus flavus/Aspergillus flavus/Aspergillus flavus/*genetics

  • Source: BMC biology [BMC Biol] 2019 Nov 11; Vol. 17 (1), pp. 88. Date of Electronic Publication: 2019 Nov 11.Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007

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Academic Journal

Functional characterisation of long intergenic non-coding RNAs through genetic interaction profiling in Saccharomyces cerevisiae.

  • Authors : Kyriakou D; Department of Biological Sciences, University of Cyprus, Nicosia, CY-1678, Cyprus.; Stavrou E

Subjects: Genome, Fungal*; RNA, Long Noncoding/RNA, Long Noncoding/RNA, Long Noncoding/*genetics ; Saccharomyces cerevisiae/Saccharomyces cerevisiae/Saccharomyces cerevisiae/*genetics

  • Source: BMC biology [BMC Biol] 2016 Dec 07; Vol. 14 (1), pp. 106. Date of Electronic Publication: 2016 Dec 07.Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007

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Academic Journal

Extensive horizontal gene transfers between plant pathogenic fungi.

  • Authors : Qiu H; Department of Ecology, Evolution, and Natural Resources, Rutgers University, Foran Hall, 59 Dudley Road, New Brunswick, New Jersey, 08901, USA. .; Cai G

Subjects: Gene Transfer, Horizontal* ; Genome, Fungal*; Ascomycota/Ascomycota/Ascomycota/*genetics

  • Source: BMC biology [BMC Biol] 2016 May 23; Vol. 14, pp. 41. Date of Electronic Publication: 2016 May 23.Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007

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Academic Journal

Genome-wide replication landscape of Candida glabrata.

  • Authors : Descorps-Declère S; Institut Pasteur, Center of Bioinformatics, Biostatistics and Integrative Biology (C3BI), F-75015, Paris, France. .; Saguez C

Subjects: Chromosomes, Fungal* ; DNA Replication* ; Genome, Fungal*

  • Source: BMC biology [BMC Biol] 2015 Sep 02; Vol. 13, pp. 69. Date of Electronic Publication: 2015 Sep 02.Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007

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Academic Journal

Combined pangenomics and transcriptomics reveals core and redundant virulence processes in a rapidly evolving fungal plant pathogen.

  • Authors : Chen H; Department of Protecting Crops and the Environment, Rothamsted Research, Harpenden, Herts, UK.; Present address: School of Agriculture, Shenzhen Campus of Sun Yat-sen University, Guangming District, Shenzhen, Guangdong, People's Republic of China.

Subjects: Transcriptome* ; Gene Expression Profiling*; Virulence/Virulence/Virulence/genetics

  • Source: BMC biology [BMC Biol] 2023 Feb 06; Vol. 21 (1), pp. 24. Date of Electronic Publication: 2023 Feb 06.Publisher: BioMed Central Country of Publication: England NLM ID: 101190720 Publication Model: Electronic Cited Medium: Internet ISSN: 1741-7007

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