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Sctensor detects many-to-many cell–cell interactions from single cell RNA-sequencing data.

• Authors : Tsuyuzaki, Koki^1,2 (AUTHOR) ; Ishii, Manabu¹ (AUTHOR); Nikaido, Itoshi^1,3 (AUTHOR)

• Source: BMC Bioinformatics. 11/7/2023, Vol. 24 Issue 1, p1-28. 28p.

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Detecting clusters of transcription factors based on a nonhomogeneous poisson process model.

• Authors : Wu, Xiaowei¹ (AUTHOR) ; Liu, Shicheng² (AUTHOR); Liang, Guanying² (AUTHOR)

• Source: BMC Bioinformatics. 12/9/2022, Vol. 23 Issue 1, p1-19. 19p.

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Knowledge graph analytics platform with LINCS and IDG for Parkinson's disease target illumination.

• Authors : Yang, Jeremy J.^1,2,3 (AUTHOR); Gessner, Christopher R.^1,4 (AUTHOR); Duerksen, Joel L.² (AUTHOR)

• Source: BMC Bioinformatics. 1/12/2022, Vol. 23 Issue 1, p1-15. 15p.

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Pathosphere.org: pathogen detection and characterization through a web-based, open source informatics platform.

• Authors : Kilianski, Andy¹; Carcel, Patrick²; Shijie Yao^2,3

• Source: BMC Bioinformatics. 12/29/2015, Vol. 16, p1-12. 12p. 1 Color Photograph, 1 Diagram, 4 Charts.

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Benchmarking workflows to assess performance and suitability of germline variant calling pipelines in clinical diagnostic assays.

• Authors : Krishnan, Vandhana^1,2 (AUTHOR); Utiramerur, Sowmithri^2,3,4 (AUTHOR) ; Ng, Zena³ (AUTHOR)

• Source: BMC Bioinformatics. 2/24/2021, Vol. 22 Issue 1, p1-17. 17p.

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edge2vec: Representation learning using edge semantics for biomedical knowledge discovery.

• Authors : Zheng Gao¹ (AUTHOR); Gang Fu² (AUTHOR); Chunping Ouyang³ (AUTHOR)

• Source: BMC Bioinformatics. 6/10/2019 Supplement 8, Vol. 20 Issue 8, p1-15. 15p. 3 Diagrams, 5 Charts, 3 Graphs.

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CompàreGenome: a command-line tool for genomic diversity estimation in prokaryotes and eukaryotes

• Authors : Gabriele Moro; Rossano Atzeni; Ali Al-Subhi

Subjects: Comparative genomics; Bioinformatics tool; Functional annotation

• Source: BMC Bioinformatics, Vol 26, Iss 1, Pp 1-12 (2025)

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A model of the spatial tumour heterogeneity in colorectal adenocarcinoma tissue.

• Authors : Kovacheva, Violeta N.¹ ; Snead, David²; Rajpoot, Nasir M.^3,4

• Source: BMC Bioinformatics. 6/24/2016, Vol. 17, p1-16. 16p. 7 Color Photographs, 4 Diagrams, 4 Charts, 4 Graphs.

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Impact of data resolution on three-dimensional structure inference methods.

• Authors : Jincheol Park¹; Shili Lin²

• Source: BMC Bioinformatics. 2/6/2016, Vol. 17, p1-13. 13p. 1 Color Photograph, 4 Charts, 3 Graphs.

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GENLIB: an R package for the analysis of genealogical data.

• Authors : Gauvin, Héloïse^1,2; Lefebvre, Jean-François²; Moreau, Claudia²

• Source: BMC Bioinformatics. 2015, Vol. 16 Issue 1, p1-10. 10p. 3 Charts, 4 Graphs.

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