نتائج البحث

Rapid bacterial identification through volatile organic compound analysis and deep learning.

• Authors : Yan, Bowen¹ (AUTHOR); Zeng, Lin¹ (AUTHOR); Lu, Yanyi¹ (AUTHOR)

• Source: BMC Bioinformatics. 11/6/2024, Vol. 25 Issue 1, p1-21. 21p.

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Predicting the pathogenicity of bacterial genomes using widely spread protein families.

• Authors : Naor-Hoffmann, Shaked¹ (AUTHOR); Svetlitsky, Dina¹ (AUTHOR); Sal-Man, Neta² (AUTHOR)

• Source: BMC Bioinformatics. 6/24/2022, Vol. 23 Issue 1, p1-18. 18p.

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leBIBIQBPP: a set of databases and a webtool for automatic phylogenetic analysis of prokaryotic sequences.

• Authors : Flandrois, Jean-Pierre¹ ; Perrière, Guy¹; Gouy, Manolo¹

• Source: BMC Bioinformatics. Aug2015, Vol. 16 Issue 1, p1-12. 12p. 1 Chart, 1 Graph.

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From learning taxonomies to phylogenetic learning: Integration of 16S rRNA gene data into FAME-based bacterial classification.

• Authors : Slabbinck, Bram^1,2 ; Waegeman, Willem²; Dawyndt, Peter³

• Source: BMC Bioinformatics. 2010, Vol. 11, Special section p1-16. 16p. 4 Diagrams, 1 Chart, 2 Graphs.

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PrimerEvalPy: a tool for in-silico evaluation of primers for targeting the microbiome.

• Authors : Vázquez-González L; Centro Singular de Investigación en Tecnoloxías Intelixentes (CiTIUS), Universidade de Santiago de Compostela, Rúa de Jenaro de la Fuente Domínguez, E15782, Santiago de Compostela, Spain. .; Instituto de Investigación Sanitaria de Santiago de Compostela (IDIS), E15706, Santiago de Compostela, Spain. .

Subjects: Microbiota*/Microbiota*/Microbiota*/genetics ; Software* ; RNA, Ribosomal, 16S*/RNA, Ribosomal, 16S*/RNA, Ribosomal, 16S*/genetics

• Source: BMC bioinformatics [BMC Bioinformatics] 2024 May 14; Vol. 25 (1), pp. 189. Date of Electronic Publication: 2024 May Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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xenoGI 3: using the DTLOR model to reconstruct the evolution of gene families in clades of microbes.

• Authors : Liu N; Department of Biology, Harvey Mudd College, Claremont, CA, USA.; Gonzalez TA

Subjects: Software* ; Bacteria*/Bacteria*/Bacteria*/classification ; Genome, Bacterial*

• Source: BMC bioinformatics [BMC Bioinformatics] 2023 Jul 21; Vol. 24 (1), pp. 295. Date of Electronic Publication: 2023 Jul Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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cognac: rapid generation of concatenated gene alignments for phylogenetic inference from large, bacterial whole genome sequencing datasets.

• Authors : Crawford RD; Department of Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, MI, 48109, USA.; Snitkin ES

Subjects: Bacteria*/Bacteria*/Bacteria*/classification ; Bacteria*/Bacteria*/Bacteria*/genetics ; Genome, Bacterial*

• Source: BMC bioinformatics [BMC Bioinformatics] 2021 Feb 15; Vol. 22 (1), pp. 70. Date of Electronic Publication: 2021 Feb 15.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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TAMA: improved metagenomic sequence classification through meta-analysis.

• Authors : Sim M; Department of Biomedical Science and Engineering, Konkuk University, Seoul, 05029, Republic of Korea.; Lee J

Subjects: Metagenome*; Bacteria/Bacteria/Bacteria/*classification ; Classification/Classification/Classification/*methods

• Source: BMC bioinformatics [BMC Bioinformatics] 2020 May 12; Vol. 21 (1), pp. 185. Date of Electronic Publication: 2020 May Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Conserved genomic neighborhood is a strong but no perfect indicator for a direct interaction of microbial gene products.

• Authors : Esch R; Faculty of Mathematics and Computer Science, University of Hagen, D-58084, Hagen, Germany.; Merkl R

Subjects: Genome, Bacterial*; Bacteria/Bacteria/Bacteria/*genetics ; Bacterial Proteins/Bacterial Proteins/Bacterial Proteins/*genetics

• Source: BMC bioinformatics [BMC Bioinformatics] 2020 Jan 03; Vol. 21 (1), pp. 5. Date of Electronic Publication: 2020 Jan 03.Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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Selection of microbial biomarkers with genetic algorithm and principal component analysis.

• Authors : Zhang P; Menzies Health Institute QLD, Griffith University, Gold Coast, Australia. .; West NP

Subjects: Algorithms* ; Bacteria*/Bacteria*/Bacteria*/classification ; Bacteria*/Bacteria*/Bacteria*/genetics

• Source: BMC bioinformatics [BMC Bioinformatics] 2019 Dec 10; Vol. 20 (Suppl 6), pp. 413. Date of Electronic Publication: 2019 Publisher: BioMed Central Country of Publication: England NLM ID: 100965194 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2105

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