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Academic Journal

Kinesin motility is driven by subdomain dynamics

Subjects: ATP hydrolysis; kinesin-microtubule system; mechanochemistry

  • Source: Hwang, Wonmuk, Matthew J Lang, and Martin Karplus. 2017. “Kinesin motility is driven by subdomain dynamics.” eLife 6 (1): e28948. doi:10.7554/eLife.28948.

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Academic Journal

A Partial Calcium-Free Linker Confers Flexibility to Inner-Ear Protocadherin-15

Subjects: adherin superfamily; tip link; mechanotransduction

  • Source: Quick submit: 2017-02-02T09:07:50-0500Powers, Robert E., Rachelle Gaudet, and Marcos Sotomayor. 2017. “A Partial Calcium-Free Linker Confers Flexibility to Inner-Ear Protocadherin-15.”

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Academic Journal

Optimization of large amorphous silicon and silica structures for molecular dynamics simulations of energetic impacts

Subjects: molecular-dynamics simulation; silicon; silica

  • Source: Samela, Juha, Scott A. Norris, Kai Nordlund, and Michael J. Aziz. 2011. “Optimization of Large Amorphous Silicon and Silica Structures for Molecular

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Atomistic Features of the Amorphous-Crystal Interface in Silicon

Subjects: silicon; amorphous semiconductors; atomistic simulation

  • Source: Bernstein, Noam, Michael J. Aziz, and Efthimios Kaxiras. Atomistic Features of the Amorphous-Crystal Interface in Silicon. Journal of Computer Aided Materials Design 5(1): 55-60.

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Dissertation/ Thesis

Equivariant Deep Learning Interatomic Potentials

Subjects: Applied mathematics

  • Source: Batzner, Simon Lutz. 2023. Equivariant Deep Learning Interatomic Potentials. Doctoral dissertation, Harvard University Graduate School of Arts and Sciences.

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Dissertation/ Thesis

Simulation studies connecting protein structure to cellular fitness

Subjects: fitness; molecular dynamics; monte carlo

  • Source: Zhao, Victor Yuanchi. 2021. Simulation studies connecting protein structure to cellular fitness. Doctoral dissertation, Harvard University Graduate School of Arts and

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Dissertation/ Thesis

Statistical Physics of Evolving Self-Replicators and Ring Neural Networks

Subjects: Statistical physics; Self-replication; Ring neural networks

  • Source: Tanaka, Hidenori. 2018. Statistical Physics of Evolving Self-Replicators and Ring Neural Networks. Doctoral dissertation, Harvard University, Graduate School of Arts & Sciences.

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Academic Journal

Glycopeptide Analogues of PSGL-1 Inhibit P-Selectin In Vitro and In Vivo

  • Source: Krishnamurthy, V. R., M. Y. R. Sardar, Y. Yu, X. Song, C. Haller, E. Dai, X. Wang, et al. 2015. “Glycopeptide Analogues of PSGL-1 Inhibit P-Selectin In Vitro and In Vivo.” Nature communications 6

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