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A unified encyclopedia of human functional DNA elements through fully automated annotation of 164 human cell types

• Authors : Libbrecht, Maxwell W.; Rodriguez, Oscar L.; Weng, Zhiping ...

Subjects: Chromatin; Genomics; Machine learning

• Source: Genome biology ; 20 ; 1 ; 180

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Integration of high-resolution promoter profiling assays reveals novel, cell type-specific transcription start sites across 115 human cell and tissue types

• Authors : Moore, Jill E; Zhang, Xiao-Ou; Elhajjajy, Shaimae I ...

Subjects: Bioinformatics; Computational Biology; Genetics and Genomics

• Source: Genome research ; 32 ; 2 ; 389-402

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A unified encyclopedia of human functional DNA elements through fully automated annotation of 164 human cell types [preprint]

• Authors : Libbrecht, Maxwell Wing; Rodriguez, Oscar; Weng, Zhiping ...

Subjects: DNA; Semi-automated genome annotation; chromatin

• Source: bioRxiv

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CAF-1 p150 and Ki-67 Regulate Nuclear Structure Throughout the Human Cell Cycle

• Authors : Matheson, Timothy D.;

Subjects: CAF-1 p150; Ki-67; Nuclear Structure

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A Newly Engineered A549 Cell Line Expressing ACE2 and TMPRSS2 Is Highly Permissive to SARS-CoV-2, Including the Delta and Omicron Variants

• Authors : Chang, Ching-Wen; Parsi, Krishna Mohan; Somasundaran, Mohan ...

Subjects: A549; ACE2; EIDD-1931

• Source: Viruses ; 14 ; 7 ; Switzerland

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Sophisticated lessons from simple organisms: appreciating the value of curiosity-driven research

• Authors : Duronio, Robert J.; O'Farrell, Patrick H.; Sluder, Greenfield ...

Subjects: C. elegans; drosophila; invertebrates

• Source: Disease models and mechanisms ; 10 ; 12 ; 1381-1389

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Spf1 and Ste24: quality controllers of transmembrane protein topology in the eukaryotic cell

• Authors : Tipper, Donald J; Harley, Carol A; Microbiology and Physiological Systems

Subjects: positive inside rule; quality control; topology

• Source: Frontiers in cell and developmental biology ; 11 ; 1220441 ; Switzerland

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Multicenter integrated analysis of noncoding CRISPRi screens

• Authors : Yao, David; Tycko, Josh; Oh, Jin Woo ...

Subjects: Gene expression profiling; Genomic analysis

• Source: Nature methods ; 21 ; 4 ; 723 ; 734 ; United States

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Factorbook.org: a Wiki-based database for transcription factor-binding data generated by the ENCODE consortium

• Authors : Wang, Jie; Zhuang, Jiali; Iyer, Sowmya ...

Subjects: Databases; Genetic; Regulatory Elements

• Source: Nucleic acids research ; 41 ; Database issue ; D171-6

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Environmental perturbations lead to extensive directional shifts in RNA processing

• Authors : Richards, Allison L.; Watza, Donovan; Findley, Anthony ...

Subjects: Biochemistry; Biophysics; and Structural Biology

• Source: PLoS genetics ; 13 ; 10 ; e1006995

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